RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 STRADAQ7RTN6 431 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 PHF13Q86YI8 300 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 DRC7Q8IY82 874 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TBC1D3Q8IZP1 549 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 C3orf20Q8ND61 904 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 OR7D4Q8NG98 312 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 PIP4K2CQ8TBX8 421 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 SETD7Q8WTS6 366 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 FAM131CQ96AQ9 280 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 SKA1Q96BD8 255 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 SLC6A18Q96N87 628 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 AGPAT1Q99943 283 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 BPIFA3Q9BQP9 254 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 SCNM1Q9BWG6 230 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 ACE2Q9BYF1 805 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 RAB6CQ9H0N0 254 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 KDM4CQ9H3R0 1056 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 EBF2Q9HAK2 575 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 AASDHPPTQ9NRN7 309 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 OR12D3Q9UGF7 316 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 SARDHQ9UL12 918 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 PPM1HQ9ULR3 514 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 WASF3Q9UPY6 502 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 PCDHGB2Q9Y5G2 931 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 PLXNB3Q9ULL4 1909 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TDRD6O60522 2096 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 SIGLEC16A6NMB1 481 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 C10orf142B7Z368 130 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 K7ERQ8 282 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 CBX4O00257 560 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 PLK4O00444 970 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 VILLO15195 856 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 FLRT2O43155 660 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 TEX33O43247 280 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 PLRG1O43660 514 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 HYAL3O43820 417 aaPredicted RBP8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 DFNA5O60443 496 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 RTN2O75298 545 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 TRIM16O95361 564 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 FERP16591 822 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 GPD1P21695 349 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 GLDCP23378 1020 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 RRM1P23921 792 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 CD38P28907 300 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 CHRNA3P32297 505 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 RFC1P35251 1148 aaPredicted RBP8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 ETFBP38117 255 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 CTSKP43235 329 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 CCT8P50990 548 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 HDAC4P56524 1084 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 C21orf59P57076 290 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 PPP2CBP62714 309 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 PPP2CAP67775 309 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 NRG1Q02297 640 aaPredicted RBP8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 GNA12Q03113 381 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 CNTN1Q12860 1018 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 PDAP1Q13442 181 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 SUZ12Q15022 739 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 ST3GAL2Q16842 350 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 ZNF423Q2M1K9 1284 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 POM121L1PQ3SYA9 428 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 FILIP1LQ4L180 1135 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 MANEALQ5VSG8 457 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 AGBL4Q5VU57 503 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 RETSATQ6NUM9 610 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 C22orf39Q6P5X5 142 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 WDR59Q6PJI9 974 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 DBX2Q6ZNG2 339 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 MON1BQ7L1V2 547 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 OR2A12Q8NGT7 310 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 FAM172AQ8WUF8 416 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 CENPIQ92674 756 aaPredicted RBP8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 SERAC1Q96JX3 654 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 SPON2Q9BUD6 331 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 TRPM6Q9BX84 2022 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 OSBPL2Q9H1P3 480 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 RETREG1Q9H6L5 497 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 ATP13A1Q9HD20 1204 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 ZNF212Q9UDV6 495 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 PCOLCE2Q9UKZ9 415 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 NCOR2Q9Y618 2525 aa8.67□□□□□ -1.02
HMGXB4-207ENST00000498212 TCRBV5S1A1TA0A578 114 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 ANKRD62A6NC57 917 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 C1QTNF9BB2RNN3 333 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 H0Y8X5 98 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 KPNA3O00505 521 aaPredicted RBP8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 KCNK3O14649 394 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 CCP110O43303 1012 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 SMAD6O43541 496 aaKnown RBP8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 LATO43561 262 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 CBFA2T3O75081 653 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 LRIG2O94898 1065 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 PRNPP04156 253 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 WNT1P04628 370 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 CTSLP07711 333 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 C1QTNF9P0C862 333 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 RHOQP17081 205 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 DESP17661 470 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 TNFAIP3P21580 790 aa8.66□□□□□ -1.02
HMGXB4-207ENST00000498212 MAT2AP31153 395 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms