RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 IDUAP35475 653 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 AVPR1AP37288 418 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 LSM3P62310 102 aaKnown RBP13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 ARL13AQ5H913 290 aaPredicted RBP13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 IFNEQ86WN2 208 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 HEATR4Q86WZ0 1026 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 PQLC3Q8N755 202 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 RPL10LQ96L21 214 aaKnown RBP13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 TARS2Q9BW92 718 aaKnown RBP13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 MUC3BQ9H195 1237 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 TASP1Q9H6P5 420 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 MARCH7Q9H992 704 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 COPG1Q9Y678 874 aaKnown RBP13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 C9IYK1 514 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 AP3B1O00203 1094 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 DYNC1LI2O43237 492 aaPredicted RBP13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 EXTL3O43909 919 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 CHEK2O96017 543 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 MTMR1Q13613 665 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 AGKQ53H12 422 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 FAM219BQ5XKK7 198 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 HTRA1Q92743 480 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 CPXM1Q96SM3 734 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 SEPT9Q9UHD8 586 aaPredicted RBP13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 PCDHGA3Q9Y5H0 932 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 A0A096LPK6 155 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 APOL1O14791 398 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 MAN1A2O60476 641 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 OSTNP61366 133 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 TFAMQ00059 246 aaKnown RBP13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 RHDQ02161 417 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 TAP1Q03518 808 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 OLIG2Q13516 323 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 NHSL2Q5HYW2 709 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 SPATA6LQ8N4H0 392 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 TRUB1Q8WWH5 349 aaKnown RBP13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 TFAP2CQ92754 450 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 APBB2Q92870 758 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 RIT2Q99578 217 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 FRMD8P1Q9BZ68 369 aaPredicted RBP13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 GLIS2Q9BZE0 524 aaPredicted RBP13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 MTMR12Q9C0I1 747 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 PCDHGC3Q9UN70 934 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 DOT1LQ8TEK3 1739 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 PRORSD1PA6NEY8 169 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 TRUB2O95900 331 aaKnown RBP13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 PRKCGP05129 697 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 TFEBP19484 476 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 ALDH4A1P30038 563 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 HPCAL1P37235 193 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 GARSP41250 739 aaKnown RBP13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 GRIA4P48058 902 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 MERTKQ12866 999 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 EEPD1Q7L9B9 569 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 MCF2L2Q86YR7 1114 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 MAGEE2Q8TD90 523 aaPredicted RBP13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 ASB9Q96DX5 294 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 TCF12Q99081 682 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 RAD21L1Q9H4I0 556 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 ZDHHC2Q9UIJ5 367 aa13.27□□□□□ -0.28
GAPVD1-220ENST00000497580 BBOX1O75936 387 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 GARTP22102 1010 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 RPL14P50914 215 aaKnown RBP13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 MTERF2Q49AM1 385 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 OR6B2Q6IFH4 312 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 NEPROQ6NW34 567 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 CDAN1Q8IWY9 1227 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 PLD5Q8N7P1 536 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 SLCO4A1Q96BD0 722 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 FBXL18Q96ME1 805 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 WDR70Q9NW82 654 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 SCHIP1Q9P0W5 487 aaPredicted RBP13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 CDH7Q9ULB5 785 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 NHSQ6T4R5 1651 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 C9JVG2 144 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 USP12O75317 370 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 CLPXO76031 633 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 ITGBL1O95965 494 aaPredicted RBP13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 INHBBP09529 407 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 SLC7A2P52569 658 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 RPS3AP61247 264 aaKnown RBP13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 SNRPFP62306 86 aaKnown RBP13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 CLCQ05315 142 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 COL16A1Q07092 1604 aaPredicted RBP13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 TMEM132AQ24JP5 1023 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 OTUD3Q5T2D3 398 aaPredicted RBP13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 LDHDQ86WU2 507 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 DHFR2Q86XF0 187 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 UBA3Q8TBC4 463 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 TMEM143Q96AN5 459 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 GLT1D1Q96MS3 346 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 ALPK1Q96QP1 1244 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 ING2Q9H160 280 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 SEPT3Q9UH03 358 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 CYTH4Q9UIA0 394 aa13.27□□□□□ -0.29
GAPVD1-220ENST00000497580 NOTOA8MTQ0 251 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 SNAP91O60641 907 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 PDGFRAP16234 1089 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 TUFMP49411 452 aaKnown RBP13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 TPD52P55327 224 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms