RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	TMEM121	Q9BTD3	319 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	CINP	Q9BW66	212 aa	Predicted RBP	13.82	□□□□□ -0.2
APTX-231	ENST00000494973	CEP44	Q9C0F1	390 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	PDF	Q9HBH1	243 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	PRDM6	Q9NQX0	595 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	GOLGA6A	Q9NYA3	693 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	PAK5	Q9P286	719 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	VPS51	Q9UID3	782 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	PIAS3	Q9Y6X2	628 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	TICRR	Q7Z2Z1	1910 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	COL4A3	Q01955	1670 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	MYOF	Q9NZM1	2061 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973		A0A0A0MRY4	1105 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	C5orf60	A6NFR6	353 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	SPECC1L-ADORA2A	F8WAN1	911 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	RNF103	O00237	685 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	MAP3K6	O95382	1288 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	ASGR2	P07307	311 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	DLD	P09622	509 aa	Known RBP	13.81	□□□□□ -0.2
APTX-231	ENST00000494973	CCNB1	P14635	433 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	DRD1	P21728	446 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	CES1	P23141	567 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	MZF1	P28698	734 aa	Predicted RBP	13.81	□□□□□ -0.2
APTX-231	ENST00000494973	RBL1	P28749	1068 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	OPRD1	P41143	372 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	MAPK8	P45983	427 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	SERPINH1	P50454	418 aa	Known RBP	13.81	□□□□□ -0.2
APTX-231	ENST00000494973	ECT2L	Q008S8	904 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	PRKCQ	Q04759	706 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	LBR	Q14739	615 aa	Known RBP	13.81	□□□□□ -0.2
APTX-231	ENST00000494973	GAB4	Q2WGN9	574 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	FUT11	Q495W5	492 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	RALGPS1	Q5JS13	557 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	MBLAC2	Q68D91	279 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	ARHGEF18	Q6ZSZ5	1173 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	NAT16	Q8N8M0	369 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	BBOF1	Q8ND07	529 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	RUBCN	Q92622	972 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	SHD	Q96IW2	340 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	SPATA13	Q96N96	652 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	IL12RB2	Q99665	862 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	FAM118B	Q9BPY3	351 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.81	□□□□□ -0.2
APTX-231	ENST00000494973	PLA2G4C	Q9UP65	541 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	HS3ST2	Q9Y278	367 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	MRPS17	Q9Y2R5	130 aa	Known RBP	13.81	□□□□□ -0.2
APTX-231	ENST00000494973	UTP11	Q9Y3A2	253 aa	Known RBP	13.81	□□□□□ -0.2
APTX-231	ENST00000494973	COL4A2	P08572	1712 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	REV3L	O60673	3130 aa		13.81	□□□□□ -0.2
APTX-231	ENST00000494973	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.8	□□□□□ -0.2
APTX-231	ENST00000494973	TBC1D3B	A6NDS4	549 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	OTOL1	A6NHN0	477 aa	Predicted RBP	13.8	□□□□□ -0.2
APTX-231	ENST00000494973	SMAP	O00193	183 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	GCAT	O75600	419 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	ZMPSTE24	O75844	475 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	KAT7	O95251	611 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	IFNB1	P01574	187 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	TNFRSF4	P43489	277 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	MMP13	P45452	471 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	ARF5	P84085	180 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
APTX-231	ENST00000494973	PTK6	Q13882	451 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	PRPSAP1	Q14558	356 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	FBXO43	Q4G163	708 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	TEX44	Q53QW1	395 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	TTC27	Q6P3X3	843 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	TRMT11	Q7Z4G4	463 aa	Known RBP	13.8	□□□□□ -0.2
APTX-231	ENST00000494973	C12orf40	Q86WS4	652 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	JAML	Q86YT9	394 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	TEX26	Q8N6G2	289 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	FAM71D	Q8N9W8	422 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.8	□□□□□ -0.2
APTX-231	ENST00000494973	OR52K2	Q8NGK3	314 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	ISG20	Q96AZ6	181 aa	Known RBP	13.8	□□□□□ -0.2
APTX-231	ENST00000494973	PSKH2	Q96QS6	385 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	FAM129A	Q9BZQ8	928 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	CIPC	Q9C0C6	399 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	POLR1E	Q9GZS1	481 aa	Known RBP	13.8	□□□□□ -0.2
APTX-231	ENST00000494973	USP29	Q9HBJ7	922 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	ELOVL2	Q9NXB9	296 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	SEPT10	Q9P0V9	454 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	WNT16	Q9UBV4	365 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	CLEC4E	Q9ULY5	219 aa		13.8	□□□□□ -0.2
APTX-231	ENST00000494973	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.79	□□□□□ -0.2
APTX-231	ENST00000494973	KCNK1	O00180	336 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	KRT14	P02533	472 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	TUBB	P07437	444 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	VAV1	P15498	845 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	CA4	P22748	312 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	PTPN3	P26045	913 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	FDFT1	P37268	417 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	KCNJ1	P48048	391 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	KDSR	Q06136	332 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	MLF2	Q15773	248 aa	Predicted RBP	13.79	□□□□□ -0.2
APTX-231	ENST00000494973	SLC14A2	Q15849	920 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	GEN1	Q17RS7	908 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	HSF5	Q4G112	596 aa	Predicted RBP	13.79	□□□□□ -0.2
APTX-231	ENST00000494973	PCGF5	Q86SE9	256 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	ADIPOR2	Q86V24	386 aa		13.79	□□□□□ -0.2
APTX-231	ENST00000494973	APCDD1	Q8J025	514 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms