RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 CD48P09326 243 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 CNR2P34972 360 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 RPS14P62263 151 aaKnown RBP11.92□□□□□ -0.5
UBA3-211ENST00000493957 SULT2A1Q06520 285 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 DPYSQ14117 519 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 ACAP1Q15027 740 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 USP39Q53GS9 565 aaKnown RBP11.92□□□□□ -0.5
UBA3-211ENST00000493957 RFX8Q6ZV50 586 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 Q6ZVU0 165 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 DEFB119Q8N690 84 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 RFFLQ8WZ73 363 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 HMCESQ96FZ2 354 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 FAM129BQ96TA1 746 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 ACE2Q9BYF1 805 aaPredicted RBP11.92□□□□□ -0.5
UBA3-211ENST00000493957 GOLPH3Q9H4A6 298 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 PCDH18Q9HCL0 1135 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 ETNK2Q9NVF9 386 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 PCDHA13Q9Y5I0 950 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 TRPM6Q9BX84 2022 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 EDDM13A0A1B0GTR0 161 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 WASH4PA8MWX3 477 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 EIF3CLB5ME19 914 aaKnown RBP11.91□□□□□ -0.5
UBA3-211ENST00000493957 RASA4BC9J798 803 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 RASA4O43374 803 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 BNIP3LO60238 219 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 RAMP2O60895 175 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 ERCC2P18074 760 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 AMPD1P23109 780 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 CYLC1P35663 651 aaPredicted RBP11.91□□□□□ -0.5
UBA3-211ENST00000493957 ARSEP51690 589 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 KRT83P78385 493 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 POLD3Q15054 466 aaPredicted RBP11.91□□□□□ -0.5
UBA3-211ENST00000493957 DLG2Q15700 870 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 CCDC6Q16204 474 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 DPYSL2Q16555 572 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 ACCSLQ4AC99 568 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 IL31Q6EBC2 164 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 C22orf39Q6P5X5 142 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 ZNF783Q6ZMS7 281 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 ARMCX6Q7L4S7 300 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 POLNQ7Z5Q5 900 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.91□□□□□ -0.5
UBA3-211ENST00000493957 FAM124AQ86V42 546 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 TMTC1Q8IUR5 882 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 ARHGAP12Q8IWW6 846 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 TMEFF1Q8IYR6 380 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 CCDC170Q8IYT3 715 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 ATP11CQ8NB49 1132 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 KDM1BQ8NB78 822 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 TEKT4Q8WW24 435 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 PRCCQ92733 491 aaPredicted RBP11.91□□□□□ -0.5
UBA3-211ENST00000493957 SIPA1Q96FS4 1042 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 EIF3CQ99613 913 aaKnown RBP11.91□□□□□ -0.5
UBA3-211ENST00000493957 BAG1Q99933 345 aaPredicted RBP11.91□□□□□ -0.5
UBA3-211ENST00000493957 C2orf49Q9BVC5 232 aaPredicted RBP11.91□□□□□ -0.5
UBA3-211ENST00000493957 RSPH9Q9H1X1 276 aaPredicted RBP11.91□□□□□ -0.5
UBA3-211ENST00000493957 MAGEH1Q9H213 219 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 TNKS2Q9H2K2 1166 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 SEMA4AQ9H3S1 761 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 CATSPERBQ9H7T0 1116 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 USP36Q9P275 1121 aaKnown RBP11.91□□□□□ -0.5
UBA3-211ENST00000493957 IMPACTQ9P2X3 320 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 SERGEFQ9UGK8 458 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 SUN2Q9UH99 717 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 SALL4Q9UJQ4 1053 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 INTUQ9ULD6 942 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 HS3ST2Q9Y278 367 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 FCF1Q9Y324 198 aaKnown RBP11.91□□□□□ -0.5
UBA3-211ENST00000493957 EPN1Q9Y6I3 576 aaPredicted RBP11.91□□□□□ -0.5
UBA3-211ENST00000493957 CACNA1EQ15878 2313 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 KNL1Q8NG31 2342 aa11.91□□□□□ -0.5
UBA3-211ENST00000493957 PLK4O00444 970 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 MID1O15344 667 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 FGF10O15520 208 aaPredicted RBP11.9□□□□□ -0.5
UBA3-211ENST00000493957 ZNF821O75541 412 aaPredicted RBP11.9□□□□□ -0.5
UBA3-211ENST00000493957 IL4RP24394 825 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 MAN1A1P33908 653 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 PSMD8P48556 350 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 SERPINH1P50454 418 aaKnown RBP11.9□□□□□ -0.5
UBA3-211ENST00000493957 TPMTP51580 245 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 E2F5Q15329 346 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 POM121L1PQ3SYA9 428 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 PMS2CLQ68D20 193 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 ZNF776Q68DI1 518 aaPredicted RBP11.9□□□□□ -0.5
UBA3-211ENST00000493957 ARHGAP36Q6ZRI8 547 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 PSTKQ8IV42 348 aaKnown RBP11.9□□□□□ -0.5
UBA3-211ENST00000493957 MMAAQ8IVH4 418 aaKnown RBP11.9□□□□□ -0.5
UBA3-211ENST00000493957 RHOT2Q8IXI1 618 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 UMODL1-AS1Q8N2C9 162 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 CHST14Q8NCH0 376 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 TSC1Q92574 1164 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 ZC3H10Q96K80 434 aaKnown RBP11.9□□□□□ -0.5
UBA3-211ENST00000493957 CSPG4P5Q96PW8 444 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 PPP1R9BQ96SB3 815 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 DESI2Q9BSY9 194 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 SLC39A8Q9C0K1 460 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 LACRTQ9GZZ8 138 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 SMOC1Q9H4F8 434 aa11.9□□□□□ -0.5
UBA3-211ENST00000493957 LRRC19Q9H756 370 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms