RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 SLC12A1Q13621 1099 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 TXNDC11Q6PKC3 985 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 JAMLQ86YT9 394 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.76■□□□□ 0.75
USP39-218ENST00000493829 GRK7Q8WTQ7 553 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 DNASE1L2Q92874 299 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 RPL10LQ96L21 214 aaKnown RBP19.76■□□□□ 0.75
USP39-218ENST00000493829 ASB2Q96Q27 587 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 PNKPQ96T60 521 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 LRRC1Q9BTT6 524 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 PCYOX1Q9UHG3 505 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 DRG1Q9Y295 367 aaKnown RBP19.76■□□□□ 0.75
USP39-218ENST00000493829 CFAP69A5D8W1 941 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.75■□□□□ 0.75
USP39-218ENST00000493829 PRRT4C9JH25 899 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 MATN3O15232 486 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 GAS8O95995 478 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 PEX11BO96011 259 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 MT-CO1P00395 513 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 POLR2EP19388 210 aaKnown RBP19.75■□□□□ 0.75
USP39-218ENST00000493829 PTPN3P26045 913 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 SLC7A5Q01650 507 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 SLC10A7Q0GE19 358 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 WASHC5Q12768 1159 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 LRRC49Q8IUZ0 686 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 PHTF2Q8N3S3 785 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 MMGT1Q8N4V1 131 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 TERB1Q8NA31 727 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 NSMCE1Q8WV22 266 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 ATXN2LQ8WWM7 1075 aaKnown RBP19.75■□□□□ 0.75
USP39-218ENST00000493829 AGAP3Q96P47 875 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 FERMT1Q9BQL6 677 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 KLHL8Q9P2G9 620 aaPredicted RBP19.75■□□□□ 0.75
USP39-218ENST00000493829 SLC27A6Q9Y2P4 619 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 MYO10Q9HD67 2058 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 TBC1D3BA6NDS4 549 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 K7ERQ8 282 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 STK10O94804 968 aaKnown RBP19.75■□□□□ 0.75
USP39-218ENST00000493829 KRT14P02533 472 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 RHOXF2BP0C7M4 288 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 PLK1P53350 603 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 LBRQ14739 615 aaKnown RBP19.75■□□□□ 0.75
USP39-218ENST00000493829 TMCO4Q5TGY1 634 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 CCDC26Q8TAB7 109 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 RUNDC3BQ96NL0 473 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 P2RY13Q9BPV8 354 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 RHOXF2Q9BQY4 288 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 TRIM31Q9BZY9 425 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 FBRSL1Q9HCM7 1045 aaKnown RBP19.75■□□□□ 0.75
USP39-218ENST00000493829 ZDHHC4Q9NPG8 344 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 DUSP12Q9UNI6 340 aa19.75■□□□□ 0.75
USP39-218ENST00000493829 FCF1Q9Y324 198 aaKnown RBP19.75■□□□□ 0.75
USP39-218ENST00000493829 ANTXRLA6NF34 631 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 KAT7O95251 611 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 HLA-DQB2P05538 268 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 BMP1P13497 986 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 GALK1P51570 392 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 IFI35P80217 286 aaPredicted RBP19.74■□□□□ 0.75
USP39-218ENST00000493829 PFKPQ01813 784 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 LMNB2Q03252 620 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 DHX34Q14147 1143 aaKnown RBP19.74■□□□□ 0.75
USP39-218ENST00000493829 DMC1Q14565 340 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 ZNF235Q14590 738 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 PON2Q15165 354 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 KIAA0907Q7Z7F0 614 aaPredicted RBP19.74■□□□□ 0.75
USP39-218ENST00000493829 RNF135Q8IUD6 432 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 ZNF567Q8N184 647 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 ATP11CQ8NB49 1132 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 WFIKKN2Q8TEU8 576 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 EXOC2Q96KP1 924 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 NT5MQ9NPB1 228 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 RBM22Q9NW64 420 aaKnown RBP eCLIP19.74■□□□□ 0.75
USP39-218ENST00000493829 ASIC3Q9UHC3 531 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 SLC25A13Q9UJS0 675 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 CA14Q9ULX7 337 aa19.74■□□□□ 0.75
USP39-218ENST00000493829 ZSCAN5CA6NGD5 496 aaPredicted RBP19.73■□□□□ 0.75
USP39-218ENST00000493829 TMCC1O94876 653 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 CD160O95971 181 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 APODP05090 189 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 EIF2DP41214 584 aaKnown RBP19.73■□□□□ 0.75
USP39-218ENST00000493829 MMP13P45452 471 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 MAXP61244 160 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 ECT2LQ008S8 904 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 ZNF33AQ06730 810 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 FAXCQ5TGI0 409 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 MARC1Q5VT66 337 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 RETSATQ6NUM9 610 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 TPRG1Q6ZUI0 275 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 MAML1Q92585 1016 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 ACDQ96AP0 544 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 NECAB3Q96P71 396 aaPredicted RBP19.73■□□□□ 0.75
USP39-218ENST00000493829 CINPQ9BW66 212 aaPredicted RBP19.73■□□□□ 0.75
USP39-218ENST00000493829 TRPV5Q9NQA5 729 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 SLC2A4RGQ9NR83 387 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 SORCS3Q9UPU3 1222 aa19.73■□□□□ 0.75
USP39-218ENST00000493829 A0A0A0MRY4 1105 aa19.72■□□□□ 0.75
USP39-218ENST00000493829 TTC24A2A3L6 582 aaPredicted RBP19.72■□□□□ 0.75
USP39-218ENST00000493829 C19orf67A6NJJ6 358 aa19.72■□□□□ 0.75
USP39-218ENST00000493829 ZBTB24O43167 697 aaPredicted RBP19.72■□□□□ 0.75
USP39-218ENST00000493829 MTSS1O43312 755 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms