RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ANKRD36BP1Q96IX9 119 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 NOX5Q96PH1 765 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 CBWD1Q9BRT8 395 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 FOXP1Q9H334 677 aaPredicted RBP7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 GPR27Q9NS67 375 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 BLOC1S4Q9NUP1 217 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 FOXJ2Q9P0K8 574 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 SEPT10Q9P0V9 454 aa7.38□□□□□ -1.23
PDLIM1-203ENST00000490391 ELOA3CA0A087WX78 387 aaPredicted RBP7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 PRAMEF33A0A0G2JMD5 474 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 ELOA3DA6NLF2 546 aaPredicted RBP7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 MUSKO15146 869 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 PRAMEF10O60809 474 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 RNGTTO60942 597 aaKnown RBP7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 LDHAP00338 332 aaKnown RBP7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 HMBSP08397 361 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 CCDC130P13994 396 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 CD33P20138 364 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 C5AR1P21730 350 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 GARTP22102 1010 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 ETV5P41161 510 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 SGSHP51688 502 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 MAP3K7CLP57077 242 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 TNP2Q05952 138 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 EFEMP1Q12805 493 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 TRIM29Q14134 588 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 SPIDRQ14159 915 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 ME3Q16798 604 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 DUOXA2Q1HG44 320 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 WDR72Q3MJ13 1102 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 ELOA3BQ3SY89 546 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 SETMARQ53H47 684 aaPredicted RBP7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 ZNF542PQ5EBM4 170 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 DTHD1Q6ZMT9 781 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 CLEC20AQ6ZU45 233 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 DSG4Q86SJ6 1040 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 ZC3H18Q86VM9 953 aaKnown RBP7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 SLC35F3Q8IY50 421 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 KDM1BQ8NB78 822 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 GALNT11Q8NCW6 608 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 ELOA3Q8NG57 546 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 WDR48Q8TAF3 677 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 SLC2A14Q8TDB8 520 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 TTC17Q96AE7 1141 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 CCDC3Q9BQI4 270 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 MED10Q9BTT4 135 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 BOCQ9BWV1 1114 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 KRTAP4-2Q9BYR5 136 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 FOXP3Q9BZS1 431 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 XYLT2Q9H1B5 865 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 SMYD3Q9H7B4 428 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 EPB41L5Q9HCM4 733 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 PREBQ9HCU5 417 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 CLIC5Q9NZA1 410 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 NCKIPSDQ9NZQ3 722 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 RASAL2Q9UJF2 1139 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 SALL4Q9UJQ4 1053 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 STOML2Q9UJZ1 356 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 NAGPAQ9UK23 515 aa7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 INTS6Q9UL03 887 aaKnown RBP7.37□□□□□ -1.23
PDLIM1-203ENST00000490391 ITIH6Q6UXX5 1313 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 TRPM6Q9BX84 2022 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 A0A087X0B3 334 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 A0A1W2PQ27 194 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 A0A1W2PQ64 194 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 A0A1W2PQC6 194 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 TARSL2A2RTX5 802 aaKnown RBP7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 TTC34A8MYJ7 566 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 C9orf172C9J069 976 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 D6RAR5 112 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 TBCAO75347 108 aaKnown RBP7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 STAU1O95793 577 aaKnown RBP7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 DDAH2O95865 285 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 TNNC2P02585 160 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 PRF1P14222 555 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 NME1P15531 152 aaKnown RBP7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 PRLRP16471 622 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 POLR2EP19388 210 aaKnown RBP7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 ITIH1P19827 911 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 MZF1P28698 734 aaPredicted RBP7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 CCKBRP32239 447 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 KIF11P52732 1056 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 HNRNPKP61978 463 aaKnown RBP eCLIP7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 KLRB1Q12918 225 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 TRIP4Q15650 581 aaPredicted RBP7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 AGBL4Q5VU57 503 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 GCNT7Q6ZNI0 430 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 CCDC186Q7Z3E2 898 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 ABI3BPQ7Z7G0 1075 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 TADA2BQ86TJ2 420 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 WDR49Q8IV35 697 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 MYOCQ99972 504 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 CALN1Q9BXU9 219 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 ZHX3Q9H4I2 956 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 PISDQ9UG56 409 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 R3HCC1Q9Y3T6 440 aaKnown RBP7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 KIF3AQ9Y496 699 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 PCDHB11Q9Y5F2 797 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 PCDHA5Q9Y5H7 936 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms