RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ADPRHP54922 357 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 OGDHQ02218 1023 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 SCAPQ12770 1279 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 RWDD4Q6NW29 188 aaKnown RBP25.57■■□□□ 1.68
HMGN1-217ENST00000489072 DSG4Q86SJ6 1040 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 PYROXD2Q8N2H3 581 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 VCPIP1Q96JH7 1222 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 EDEM3Q9BZQ6 932 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 EBF2Q9HAK2 575 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 ATP13A1Q9HD20 1204 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 OSGEPQ9NPF4 335 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 CBX4O00257 560 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 ATMINO43313 823 aaPredicted RBP25.56■■□□□ 1.68
HMGN1-217ENST00000489072 CTSLP07711 333 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 RHOQP17081 205 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 PMLP29590 882 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 PBX1P40424 430 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 AFF3P51826 1226 aaKnown RBP25.56■■□□□ 1.68
HMGN1-217ENST00000489072 ZSCAN23Q3MJ62 389 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 POM121L1PQ3SYA9 428 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 LAYNQ6UX15 382 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.56■■□□□ 1.68
HMGN1-217ENST00000489072 SLFN11Q7Z7L1 901 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 OR2A12Q8NGT7 310 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 OR14C36Q8NHC7 312 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 PIP4K2CQ8TBX8 421 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 TBC1D31Q96DN5 1066 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 CNPY3Q9BT09 278 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 IL21RQ9HBE5 538 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 TMEM248Q9NWD8 314 aa25.56■■□□□ 1.68
HMGN1-217ENST00000489072 ANKRD62A6NC57 917 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 DDX3XO00571 662 aaKnown RBP eCLIP25.55■■□□□ 1.682e-15■□□□□ 10.9
HMGN1-217ENST00000489072 RTN2O75298 545 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 SKILP12757 684 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 PTMSP20962 102 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 ACVRL1P37023 503 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 CLCN6P51797 869 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 TPM4P67936 248 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 ARF5P84085 180 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 ZNF252P-AS1Q0IIN9 211 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 MAMLD1Q13495 774 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 FIGNQ5HY92 759 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 FAM46CQ5VWP2 391 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 SCYL2Q6P3W7 929 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 C22orf39Q6P5X5 142 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 DCUN1D2Q6PH85 259 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 TNKS2Q9H2K2 1166 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 DNAI1Q9UI46 699 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 ACTL7AQ9Y615 435 aa25.55■■□□□ 1.68
HMGN1-217ENST00000489072 A0A1W2PPC4 97 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 RNF103O00237 685 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 ZNF821O75541 412 aaPredicted RBP25.54■■□□□ 1.68
HMGN1-217ENST00000489072 GRIA4P48058 902 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 MAPKAPK2P49137 400 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 CCR5P51681 352 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 KLHL30Q0D2K2 578 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 CNTN1Q12860 1018 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 KIF19Q2TAC6 998 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 PLEKHA7Q6IQ23 1121 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 PPP1R2P3Q6NXS1 205 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 CHST14Q8NCH0 376 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 ACE2Q9BYF1 805 aaPredicted RBP25.54■■□□□ 1.68
HMGN1-217ENST00000489072 RETREG1Q9H6L5 497 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 GAREM1Q9H706 876 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 FZD10Q9ULW2 581 aa25.54■■□□□ 1.68
HMGN1-217ENST00000489072 C1QTNF3-AMACRE9PGA6 284 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 CD160O95971 181 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 CHRNA3P32297 505 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 SERPINH1P50454 418 aaKnown RBP25.53■■□□□ 1.68
HMGN1-217ENST00000489072 UBASH3AP57075 661 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 PPP2CBP62714 309 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 PPP2CAP67775 309 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 SLC14A1Q13336 389 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 HLA-BQ31612 363 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 KCNT1Q5JUK3 1230 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 AGBL4Q5VU57 503 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 RETSATQ6NUM9 610 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 TMC6Q7Z403 805 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 ARHGEF2Q92974 986 aaKnown RBP25.53■■□□□ 1.68
HMGN1-217ENST00000489072 SLC6A18Q96N87 628 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 SLC32A1Q9H598 525 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 PARVAQ9NVD7 372 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 ANKRD6Q9Y2G4 727 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 FNDC3AQ9Y2H6 1198 aaKnown RBP25.53■■□□□ 1.68
HMGN1-217ENST00000489072 SNX11Q9Y5W9 270 aa25.53■■□□□ 1.68
HMGN1-217ENST00000489072 SLC7A4O43246 635 aa25.52■■□□□ 1.68
HMGN1-217ENST00000489072 PLRG1O43660 514 aaKnown RBP25.52■■□□□ 1.68
HMGN1-217ENST00000489072 FTLP02792 175 aaPredicted RBP25.52■■□□□ 1.68
HMGN1-217ENST00000489072 GZMAP12544 262 aa25.52■■□□□ 1.68
HMGN1-217ENST00000489072 L1CAMP32004 1257 aa25.52■■□□□ 1.68
HMGN1-217ENST00000489072 TEAD4Q15561 434 aa25.52■■□□□ 1.68
HMGN1-217ENST00000489072 EFHC2Q5JST6 749 aa25.52■■□□□ 1.68
HMGN1-217ENST00000489072 IL27RAQ6UWB1 636 aa25.52■■□□□ 1.68
HMGN1-217ENST00000489072 CCDC114Q96M63 670 aa25.52■■□□□ 1.68
HMGN1-217ENST00000489072 CAMK1GQ96NX5 476 aa25.52■■□□□ 1.68
HMGN1-217ENST00000489072 FARP1Q9Y4F1 1045 aaPredicted RBP25.52■■□□□ 1.68
HMGN1-217ENST00000489072 EPG5Q9HCE0 2579 aa25.52■■□□□ 1.68
HMGN1-217ENST00000489072 TBC1D3DA0A087WVF3 549 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 TBC1D3IA0A087WXS9 549 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 TBC1D3EA0A087X179 549 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms