RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SAC3D1A6NKF1 404 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 EIF3JO75822 258 aaKnown RBP4.76□□□□□ -1.65
ITGB1-214ENST00000488427 OAZ2O95190 189 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 PRF1P14222 555 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 HOXD9P28356 352 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-214ENST00000488427 NR4A2P43354 598 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 POLGP54098 1239 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-214ENST00000488427 ARL4CP56559 192 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 FAM3BP58499 235 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-214ENST00000488427 ACTR2P61160 394 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 PMPCAQ10713 525 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 ZRSR2Q15696 482 aaKnown RBP4.76□□□□□ -1.65
ITGB1-214ENST00000488427 INPP5JQ15735 1006 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-214ENST00000488427 SMAD1Q15797 465 aaKnown RBP4.76□□□□□ -1.65
ITGB1-214ENST00000488427 MIDNQ504T8 468 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 VWA5B1Q5TIE3 1220 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 LIN54Q6MZP7 749 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 LVRNQ6Q4G3 990 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 TMEM200AQ86VY9 491 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 SAMD9LQ8IVG5 1584 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 TMEM57Q8N5G2 664 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 DPP10Q8N608 796 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 LPAR1Q92633 364 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 ARRDC3Q96B67 414 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 SH3KBP1Q96B97 665 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 MIA2Q96PC5 1412 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 IFT27Q9BW83 186 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 FOXP1Q9H334 677 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-214ENST00000488427 NOD2Q9HC29 1040 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 TXNRD2Q9NNW7 524 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 SEMA4BQ9NPR2 832 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-214ENST00000488427 GRHPRQ9UBQ7 328 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 ANAPC4Q9UJX5 808 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-214ENST00000488427 SLC4A4Q9Y6R1 1079 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 PCNTO95613 3336 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 PNPLA6Q8IY17 1366 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 COL3A1P02461 1466 aaPredicted RBP4.75□□□□□ -1.65
ITGB1-214ENST00000488427 PTCH1Q13635 1447 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 IGLV5-39A0A0G2JS06 123 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 GRM8O00222 908 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 KAT7O95251 611 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 TK1P04183 234 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 CYP19A1P11511 503 aaPredicted RBP4.75□□□□□ -1.65
ITGB1-214ENST00000488427 CYP4B1P13584 511 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 PKMP14618 531 aaKnown RBP4.75□□□□□ -1.65
ITGB1-214ENST00000488427 CDC25AP30304 524 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 ADD2P35612 726 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 PNPLA4P41247 253 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 CCT5P48643 541 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 CYP2J2P51589 502 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 PNLIPRP1P54315 467 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 GAD2Q05329 585 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 CDK18Q07002 472 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 DCTN1Q14203 1278 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 PGM5Q15124 567 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 C5orf22Q49AR2 442 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 GXYLT1Q4G148 440 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 EPHA10Q5JZY3 1008 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 AADACL2Q6P093 401 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 RRAGAQ7L523 313 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 RASGRP2Q7LDG7 609 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 CAMK1DQ8IU85 385 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 ANKRD18AQ8IVF6 992 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 ANKRD44Q8N8A2 993 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 USP38Q8NB14 1042 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 OR1N1Q8NGS0 311 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 SPPL3Q8TCT6 385 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 LRRC59Q96AG4 307 aaKnown RBP4.75□□□□□ -1.65
ITGB1-214ENST00000488427 SCLT1Q96NL6 688 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 SPRTNQ9H040 489 aaPredicted RBP4.75□□□□□ -1.65
ITGB1-214ENST00000488427 RASSF1Q9NS23 344 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 ARL15Q9NXU5 204 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 HEY2Q9UBP5 337 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 UTS2RQ9UKP6 389 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 PKP3Q9Y446 797 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 NCOA2Q15596 1464 aa4.75□□□□□ -1.65
ITGB1-214ENST00000488427 DISP2A7MBM2 1401 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 SLIT1O75093 1534 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 ASXL1Q8IXJ9 1541 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 GPATCH8Q9UKJ3 1502 aaKnown RBP4.74□□□□□ -1.65
ITGB1-214ENST00000488427 LY6G6EA0A0G2JKS1 128 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 FAM90A10PA6NDY2 464 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 KRTAP29-1A8MX34 341 aaPredicted RBP4.74□□□□□ -1.65
ITGB1-214ENST00000488427 FOXO6A8MYZ6 492 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 H3BNX3 289 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 IPO5O00410 1097 aaKnown RBP4.74□□□□□ -1.65
ITGB1-214ENST00000488427 STRNO43815 780 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 FAM155BO75949 473 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 KRT38O76015 456 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 HEXIM1O94992 359 aaKnown RBP4.74□□□□□ -1.65
ITGB1-214ENST00000488427 KLKB1P03952 638 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 DHRS4L1P0CG22 281 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 SKIV2L2P42285 1042 aaKnown RBP4.74□□□□□ -1.65
ITGB1-214ENST00000488427 THOC5Q13769 683 aaKnown RBP4.74□□□□□ -1.65
ITGB1-214ENST00000488427 EFR3AQ14156 821 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 ANKRD1Q15327 319 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 CTXN3Q4LDR2 81 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 KIAA1755Q5JYT7 1200 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms