RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 TXNDC8Q6A555 127 aa22.05■■□□□ 1.12
TRADD-202ENST00000486556 SETD3Q86TU7 594 aaPredicted RBP22.05■■□□□ 1.12
TRADD-202ENST00000486556 SLC26A11Q86WA9 606 aa22.05■■□□□ 1.12
TRADD-202ENST00000486556 ZNF354CQ86Y25 554 aa22.05■■□□□ 1.12
TRADD-202ENST00000486556 ZNF599Q96NL3 588 aa22.05■■□□□ 1.12
TRADD-202ENST00000486556 SLC25A51Q9H1U9 297 aa22.05■■□□□ 1.12
TRADD-202ENST00000486556 ZNF180Q9UJW8 692 aa22.05■■□□□ 1.12
TRADD-202ENST00000486556 NYNRINQ9P2P1 1898 aaKnown RBP22.05■■□□□ 1.12
TRADD-202ENST00000486556 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.04■■□□□ 1.12
TRADD-202ENST00000486556 IQANK1A0A1B0GTG1 560 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 A0A1B0GVM2 712 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 TCAF2A6NFQ2 919 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 H3BNC9 293 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 INHBAP08476 426 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 IRF1P10914 325 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 DNAJB1P25685 340 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 LSP1P33241 339 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 ZNF177Q13360 481 aaPredicted RBP22.04■■□□□ 1.12
TRADD-202ENST00000486556 EFTUD2Q15029 972 aaKnown RBP eCLIP22.04■■□□□ 1.12
TRADD-202ENST00000486556 PPM1LQ5SGD2 360 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 TTC19Q6DKK2 380 aaPredicted RBP22.04■■□□□ 1.12
TRADD-202ENST00000486556 ZNF449Q6P9G9 518 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 PRPF39Q86UA1 669 aaKnown RBP22.04■■□□□ 1.12
TRADD-202ENST00000486556 SRRM1Q8IYB3 904 aaKnown RBP22.04■■□□□ 1.12
TRADD-202ENST00000486556 MICAL1Q8TDZ2 1067 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 MRRFQ96E11 262 aaKnown RBP22.04■■□□□ 1.12
TRADD-202ENST00000486556 ZNF419Q96HQ0 510 aaPredicted RBP22.04■■□□□ 1.12
TRADD-202ENST00000486556 GCNAQ96QF7 691 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 C17orf80Q9BSJ5 609 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 IL22Q9GZX6 179 aa22.04■■□□□ 1.12
TRADD-202ENST00000486556 ILVBLA1L0T0 632 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 FAM159BA6NKW6 160 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 PRAMEF11O60813 436 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 FGF19O95750 216 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 CHN1P15882 459 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 SLC7A9P82251 487 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 GNA12Q03113 381 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 MPP3Q13368 585 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 LGSNQ5TDP6 509 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 LEKR1Q6ZMV7 388 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 SPATA22Q8NHS9 363 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 MDM1Q8TC05 714 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 PABPC5Q96DU9 382 aaKnown RBP22.03■■□□□ 1.12
TRADD-202ENST00000486556 SLC22A12Q96S37 553 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 VPS45Q9NRW7 570 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 SYBUQ9NX95 663 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 SMPD4Q9NXE4 827 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 UBP1Q9NZI7 540 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 ZNF510Q9Y2H8 683 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 TBC1D30Q9Y2I9 924 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 USP12O75317 370 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 SLC18A1P54219 525 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 RPS24P62847 133 aaKnown RBP22.03■■□□□ 1.12
TRADD-202ENST00000486556 SLC10A7Q0GE19 358 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 FRG1Q14331 258 aaKnown RBP22.03■■□□□ 1.12
TRADD-202ENST00000486556 SPANXN3Q5MJ09 141 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 TMEM135Q86UB9 458 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 CCDC117Q8IWD4 279 aaPredicted RBP22.03■■□□□ 1.12
TRADD-202ENST00000486556 HS6ST3Q8IZP7 471 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 PRICKLE1Q96MT3 831 aaPredicted RBP22.03■■□□□ 1.12
TRADD-202ENST00000486556 TBL1YQ9BQ87 522 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 ATXN3LQ9H3M9 355 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 ASAH2Q9NR71 780 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 INTS9Q9NV88 658 aaKnown RBP22.03■■□□□ 1.12
TRADD-202ENST00000486556 HAUS2Q9NVX0 235 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 CPQQ9Y646 472 aa22.03■■□□□ 1.12
TRADD-202ENST00000486556 TMEM120BA0PK00 339 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 MT-CYBP00156 380 aaPredicted RBP22.02■■□□□ 1.12
TRADD-202ENST00000486556 CREB1P16220 341 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 ACVRL1P37023 503 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 CRADDP78560 199 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 ARMC3Q5W041 872 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 PDE12Q6L8Q7 609 aaKnown RBP22.02■■□□□ 1.12
TRADD-202ENST00000486556 CTAGE3PQ8IX95 158 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 PPM1NQ8N819 430 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 ADAMTS19Q8TE59 1207 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 CDKL2Q92772 493 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 WBP2Q969T9 261 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 IMP4Q96G21 291 aaKnown RBP22.02■■□□□ 1.12
TRADD-202ENST00000486556 SAMD11Q96NU1 681 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 SMC6Q96SB8 1091 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 TRABDQ9H4I3 376 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 SSU72Q9NP77 194 aaKnown RBP22.02■■□□□ 1.12
TRADD-202ENST00000486556 KCNK9Q9NPC2 374 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 PIH1D1Q9NWS0 290 aaKnown RBP22.02■■□□□ 1.12
TRADD-202ENST00000486556 PRDM4Q9UKN5 801 aa22.02■■□□□ 1.12
TRADD-202ENST00000486556 GREM1O60565 184 aa22.01■■□□□ 1.11
TRADD-202ENST00000486556 ADRA1AP35348 466 aa22.01■■□□□ 1.11
TRADD-202ENST00000486556 ETFBP38117 255 aa22.01■■□□□ 1.11
TRADD-202ENST00000486556 LBRQ14739 615 aaKnown RBP22.01■■□□□ 1.11
TRADD-202ENST00000486556 CRYMQ14894 314 aa22.01■■□□□ 1.11
TRADD-202ENST00000486556 TMCO4Q5TGY1 634 aa22.01■■□□□ 1.11
TRADD-202ENST00000486556 ZNF783Q6ZMS7 281 aa22.01■■□□□ 1.11
TRADD-202ENST00000486556 Q6ZNB5 142 aa22.01■■□□□ 1.11
TRADD-202ENST00000486556 MAB21L3Q8N8X9 362 aa22.01■■□□□ 1.11
TRADD-202ENST00000486556 CORO1BQ9BR76 489 aa22.01■■□□□ 1.11
TRADD-202ENST00000486556 NT5MQ9NPB1 228 aa22.01■■□□□ 1.11
TRADD-202ENST00000486556 LSM7Q9UK45 103 aaKnown RBP22.01■■□□□ 1.11
TRADD-202ENST00000486556 TRAV19A0A0A6YYK7 116 aa22.01■■□□□ 1.11
TRADD-202ENST00000486556 FAM237BA0A1B0GVD1 139 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms