RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 PCSK1P29120 753 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 NCKAP1LP55160 1127 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 TAF10Q12962 218 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 BMP2KLQ5H9B9 411 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 SLC39A4Q6P5W5 647 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 FAM171BQ6P995 826 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 VSTM1Q6UX27 236 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 C4orf50Q6ZRC1 276 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 KCNK18Q7Z418 384 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 CACUL1Q86Y37 369 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 TMPRSS6Q8IU80 811 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 TMEM86AQ8N2M4 240 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 KCNE4Q8WWG9 221 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 WASF1Q92558 559 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 PRCCQ92733 491 aaPredicted RBP6.95□□□□□ -1.3
SMC4-217ENST00000485867 WBP2Q969T9 261 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 RELTQ969Z4 430 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 MYLPFQ96A32 169 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 SIPA1Q96FS4 1042 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 DHRS1Q96LJ7 313 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMC4-217ENST00000485867 MSTO1Q9BUK6 570 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 TIPINQ9BVW5 301 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 LRWD1Q9UFC0 647 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 DNM3Q9UQ16 869 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 CLCA2Q9UQC9 943 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.95□□□□□ -1.3
SMC4-217ENST00000485867 SH3BP1Q9Y3L3 701 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 TDRD6O60522 2096 aaKnown RBP6.95□□□□□ -1.3
SMC4-217ENST00000485867 H0YCG3 227 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 K7ENP7 123 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 COCHO43405 550 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 ATP2C2O75185 946 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 GSNP06396 782 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 ITGAVP06756 1048 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 CISD3P0C7P0 127 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 FDPSP14324 419 aaKnown RBP6.94□□□□□ -1.3
SMC4-217ENST00000485867 TYRP14679 529 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 CR2P20023 1033 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 ANXA13P27216 316 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 ACSL1P33121 698 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 PNPLA4P41247 253 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 ACOT2P49753 483 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 ZNF132P52740 706 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 COPAP53621 1224 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 PSMC1P62191 440 aaKnown RBP6.94□□□□□ -1.3
SMC4-217ENST00000485867 NOP14P78316 857 aaKnown RBP6.94□□□□□ -1.3
SMC4-217ENST00000485867 NFKB2Q00653 900 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 ILKQ13418 452 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 ENPP2Q13822 863 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 SHBQ15464 509 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 INO80CQ6PI98 192 aaPredicted RBP6.94□□□□□ -1.3
SMC4-217ENST00000485867 KDM7AQ6ZMT4 941 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 TMC6Q7Z403 805 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 FAM124AQ86V42 546 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 IGDCC3Q8IVU1 814 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 ADGRF2Q8IZF7 708 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 EID2Q8N6I1 236 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 EXD3Q8N9H8 876 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 NUP43Q8NFH3 380 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 SAP25Q8TEE9 199 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 XPO6Q96QU8 1125 aaKnown RBP6.94□□□□□ -1.3
SMC4-217ENST00000485867 JMJD8Q96S16 334 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 ELF4Q99607 663 aaPredicted RBP6.94□□□□□ -1.3
SMC4-217ENST00000485867 SYT15Q9BQS2 421 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 ORAI3Q9BRQ5 295 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 BBS2Q9BXC9 721 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 DPH1Q9BZG8 443 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 XYLT2Q9H1B5 865 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 EHD2Q9NZN4 543 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 IMPACTQ9P2X3 320 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 MAGEC2Q9UBF1 373 aaPredicted RBP6.94□□□□□ -1.3
SMC4-217ENST00000485867 KCNG1Q9UIX4 513 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 PCDHB1Q9Y5F3 818 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 DOCK9Q9BZ29 2069 aa6.94□□□□□ -1.3
SMC4-217ENST00000485867 COL27A1Q8IZC6 1860 aaPredicted RBP6.94□□□□□ -1.3
SMC4-217ENST00000485867 RELNP78509 3460 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 PP2D1A8MPX8 630 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 F8VP50 259 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 VILLO15195 856 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 TSPAN3O60637 253 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 CDC45O75419 566 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 KRT38O76015 456 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 MT-CO3P00414 261 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 AFPP02771 609 aaKnown RBP6.93□□□□□ -1.3
SMC4-217ENST00000485867 IRF1P10914 325 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 ACADMP11310 421 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 MYF5P13349 255 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 ABCB4P21439 1286 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 CD27P26842 260 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 LHX1P48742 406 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 PMS1P54277 932 aaKnown RBP6.93□□□□□ -1.3
SMC4-217ENST00000485867 ERVPABLB-1P60509 514 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 ORC2Q13416 577 aaPredicted RBP6.93□□□□□ -1.3
SMC4-217ENST00000485867 SERINC3Q13530 473 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 ZNF174Q15697 407 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 PRAMEF14Q5SWL7 426 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 ADAT2Q7Z6V5 191 aaKnown RBP6.93□□□□□ -1.3
SMC4-217ENST00000485867 FAM129CQ86XR2 697 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 TAB3Q8N5C8 712 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms