RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 OR51B4Q9Y5P0 310 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 MYO18AQ92614 2054 aaKnown RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 A0A0D9SEW6 157 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 GRID2IPA4D2P6 1211 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 SHISA7A6NL88 538 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 C1QTNF3-AMACRE9PGA6 284 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 DFFAO00273 331 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 PPP1R12AO14974 1030 aaPredicted RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 ALOX15BO15296 676 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 MTSS1O43312 755 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 ATP9BO43861 1147 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 SDHBP21912 280 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 AMPD1P23109 780 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 CES1P23141 567 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 OXTRP30559 389 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 HSPA9P38646 679 aaKnown RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 MAPK8P45983 427 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 SERPINH1P50454 418 aaKnown RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 PAPOLAP51003 745 aaKnown RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 DNA2P51530 1060 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 SNRPD1P62314 119 aaKnown RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 LMNB2Q03252 620 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 ZNF33AQ06730 810 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 ENPP2Q13822 863 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 ELAVL3Q14576 367 aaKnown RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 GRM3Q14832 879 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 PDK1Q15118 436 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 DLG2Q15700 870 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 PPP2R5EQ16537 467 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 CA9Q16790 459 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 HNRNPA1L2Q32P51 320 aaKnown RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 TTC31Q49AM3 519 aaPredicted RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 DAB2IPQ5VWQ8 1189 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 NAIF1Q69YI7 327 aaPredicted RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 Q6ZS52 159 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 CYP4V2Q6ZWL3 525 aaPredicted RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 NT5DC3Q86UY8 548 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 PLPP6Q8IY26 295 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 APCDD1Q8J025 514 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 SH2D3CQ8N5H7 860 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 ATPAF2Q8N5M1 289 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 GPR161Q8N6U8 529 aaKnown RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 PCDH20Q8N6Y1 951 aaKnown RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 LRRC57Q8N9N7 239 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 TTC13Q8NBP0 860 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 ZBTB44Q8NCP5 570 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 OR2T3Q8NH03 318 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 CYB5D2Q8WUJ1 264 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 SORCS1Q8WY21 1168 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 OR8D1Q8WZ84 308 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 RAPGEF5Q92565 580 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 TSC1Q92574 1164 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 PRCCQ92733 491 aaPredicted RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 P3H4Q92791 437 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 HAUS1Q96CS2 278 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 ALG14Q96F25 216 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 SPACA7Q96KW9 195 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 RNF157Q96PX1 679 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 TMEM245Q9H330 911 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 LRRC19Q9H756 370 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 DYRK4Q9NR20 520 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 PRMT8Q9NR22 394 aaPredicted RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 CACNA2D2Q9NY47 1150 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 UBA2Q9UBT2 640 aaPredicted RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 EBF1Q9UH73 591 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 IPO11Q9UI26 975 aaKnown RBP8.44□□□□□ -1.06
SF3A1-208ENST00000485618 VPS51Q9UID3 782 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 GMEB2Q9UKD1 530 aa8.44□□□□□ -1.06
SF3A1-208ENST00000485618 PKD1L2Q7Z442 2459 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 TCRBV21S2A2A0A5A6 115 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 SGK1O00141 431 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 DCLK1O15075 740 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 AXIN1O15169 862 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 MAP3K13O43283 966 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 PRAMEF11O60813 436 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 LILRB5O75023 590 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 STK10O94804 968 aaKnown RBP8.43□□□□□ -1.06
SF3A1-208ENST00000485618 POP4O95707 220 aaKnown RBP8.43□□□□□ -1.06
SF3A1-208ENST00000485618 ADH1BP00325 375 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 DNTTP04053 509 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 PRNPP04156 253 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 KRT10P13645 584 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 TGM2P21980 687 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 NFKBIAP25963 317 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 ACVRL1P37023 503 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 IL12RB1P42701 662 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 WASP42768 502 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 ARSEP51690 589 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 IL10RBQ08334 325 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 CAMK2GQ13555 558 aaPredicted RBP8.43□□□□□ -1.06
SF3A1-208ENST00000485618 PAFAH1B3Q15102 231 aaKnown RBP8.43□□□□□ -1.06
SF3A1-208ENST00000485618 ATP13A4Q4VNC1 1196 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 HS1BP3Q53T59 392 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 SEL1L2Q5TEA6 688 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 TMEM215Q68D42 235 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 ZNF776Q68DI1 518 aaPredicted RBP8.43□□□□□ -1.06
SF3A1-208ENST00000485618 TXNRD3NBQ6F5E7 133 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 SLC36A4Q6YBV0 504 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 SPOCD1Q6ZMY3 1216 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 LONP2Q86WA8 852 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms