RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 HCN2Q9UL51 889 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 ZNF148Q9UQR1 794 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 FAM50BQ9Y247 325 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 SLC27A6Q9Y2P4 619 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 SCN8AQ9UQD0 1980 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 HACD1B0YJ81 288 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 PRRT4C9JH25 899 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 BHMG1C9JSJ3 638 aaPredicted RBP9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 F5H423 210 aaPredicted RBP9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 SPECC1L-ADORA2AF8WAN1 911 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 K7ERQ8 282 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 SGK1O00141 431 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 NCAM2O15394 837 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 SMAD6O43541 496 aaKnown RBP9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 SRFP11831 508 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 CCNCP24863 283 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 CD68P34810 354 aaPredicted RBP9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 ETFBP38117 255 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 VPS41P49754 854 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 TDGQ13569 410 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 PTK6Q13882 451 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 IHHQ14623 411 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 NAA30Q147X3 362 aaPredicted RBP9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 TRADDQ15628 312 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 TEX35Q5T0J7 233 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 FAXCQ5TGI0 409 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 GRAMD4Q6IC98 578 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 C8orf74Q6P047 294 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 ZNF354CQ86Y25 554 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 CCDC105Q8IYK2 499 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 ZNF567Q8N184 647 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 TAB3Q8N5C8 712 aaPredicted RBP9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 TERB1Q8NA31 727 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 MNS1Q8NEH6 495 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 CCDC110Q8TBZ0 833 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 CSGALNACT1Q8TDX6 532 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 CYB5D2Q8WUJ1 264 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 DNASE1L2Q92874 299 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 VOPP1Q96AW1 172 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 MRGPRX3Q96LB0 322 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 NECAB3Q96P71 396 aaPredicted RBP9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 XPO6Q96QU8 1125 aaKnown RBP9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 IL12RB2Q99665 862 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 HINFPQ9BQA5 517 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 LRRC1Q9BTT6 524 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 EPC1Q9H2F5 836 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 ZDHHC4Q9NPG8 344 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 TRPV5Q9NQA5 729 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 SLC2A4RGQ9NR83 387 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 HOMER3Q9NSC5 361 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 SEPT10Q9P0V9 454 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 LHX3Q9UBR4 397 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 PRKAG3Q9UGI9 489 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 DUSP12Q9UNI6 340 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 DRG1Q9Y295 367 aaKnown RBP9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 PIAS3Q9Y6X2 628 aa9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 V9GYY5 206 aaPredicted RBP9.14□□□□□ -0.95
NUDCD3-208ENST00000480209 VCANP13611 3396 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 TTC24A2A3L6 582 aaPredicted RBP9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 MATN3O15232 486 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 TP73O15350 636 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 ZNF821O75541 412 aaPredicted RBP9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 TMCC1O94876 653 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 KAT7O95251 611 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 METTL18O95568 372 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 ECEL1O95672 775 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 IFNB1P01574 187 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 CCNB1P14635 433 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 NFKB1P19838 968 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 RPL22P35268 128 aaKnown RBP9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 SLC7A5Q01650 507 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 DR1Q01658 176 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 ZNF33AQ06730 810 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 SLC12A1Q13621 1099 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 LBRQ14739 615 aaKnown RBP9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 PON2Q15165 354 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 CYTH1Q15438 398 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 PTPRNQ16849 979 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 ANKRD20A2Q5SQ80 823 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 TMCO4Q5TGY1 634 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 ANKRD20A1Q5TYW2 823 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 ANKRD20A3Q5VUR7 823 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 MBLAC2Q68D91 279 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 HEATR6Q6AI08 1181 aaKnown RBP9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 FSTL4Q6MZW2 842 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 RNF135Q8IUD6 432 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 AHI1Q8N157 1196 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 TEX26Q8N6G2 289 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 TSEN2Q8NCE0 465 aaKnown RBP9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 ATL2Q8NHH9 583 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 WFIKKN2Q8TEU8 576 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 FATE1Q969F0 183 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 TTC17Q96AE7 1141 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 EXOC2Q96KP1 924 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 RPL10LQ96L21 214 aaKnown RBP9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 AGAP3Q96P47 875 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 ASB2Q96Q27 587 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 C2orf49Q9BVC5 232 aaPredicted RBP9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 BRD8Q9H0E9 1235 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms