RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 RAB26Q9ULW5 256 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 RNF112Q9ULX5 631 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CHKBQ9Y259 395 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 FARSAQ9Y285 508 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 MAU2Q9Y6X3 613 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 IFNA5P01569 189 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 THP07101 528 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 FCER1AP12319 257 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 SRCP12931 536 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 PEPDP12955 493 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 RPS6KB1P23443 525 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 GRK5P34947 590 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 GRIA2P42262 883 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ARCN1P48444 511 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 RPIAP49247 311 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 GPSM2P81274 684 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CCZ1BP86790 482 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CCZ1P86791 482 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 FAPQ12884 760 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 MTAPQ13126 283 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ZNF177Q13360 481 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 RFX4Q33E94 735 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 C2orf76Q3KRA6 126 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 HSD17B12Q53GQ0 312 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 PARK7Q99497 189 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 C9orf16Q9BUW7 83 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CATSPERZQ9NTU4 200 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 TBC1D13Q9NVG8 400 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.5□□□□□ -1.534e-6■■■■□ 20.1
USF3-202ENST00000478658 PAK5Q9P286 719 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 MAPK8IP1Q9UQF2 711 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 PCDHGB6Q9Y5F9 930 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 SERPINB7O75635 380 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 URODP06132 367 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ITGA2BP08514 1039 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CHRNB1P11230 501 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 RPL4P36578 427 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 GPC5P78333 572 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 PPARDQ03181 441 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.5□□□□□ -1.53
USF3-202ENST00000478658 FAM153CQ494X1 144 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 NIPAL3Q6P499 406 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 C3orf62Q6ZUJ4 267 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 RASGRP2Q7LDG7 609 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 REC114Q7Z4M0 266 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 GPAT4Q86UL3 456 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ELMOD2Q8IZ81 293 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 NKD1Q969G9 470 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 PNMA5Q96PV4 448 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 HGH1Q9BTY7 390 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 POLR3EQ9NVU0 708 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 SLC9A2Q9UBY0 812 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ZMYM6O95789 1325 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 GRIN3BO60391 1043 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CD2P06729 351 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 MAGEA6P43360 314 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 VSX2P58304 361 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 ITPK1Q13572 414 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 RAB35Q15286 201 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 C10orf62Q5T681 223 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 GPR107Q5VW38 600 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 PET117Q6UWS5 81 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ZNF767PQ75MW2 155 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ADGRG2Q8IZP9 1017 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 IQCF1Q8N6M8 205 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 SLC12A5Q9H2X9 1139 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 SAV1Q9H4B6 383 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 MYNNQ9NPC7 610 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 IL1RAPQ9NPH3 570 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 UBFD1O14562 309 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 ERAL1O75616 437 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 KCNK5O95279 499 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 F9P00740 461 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 SDSP20132 328 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 NRIP1P48552 1158 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CRYMQ14894 314 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ARHGAP27Q6ZUM4 889 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 TRAPPC11Q7Z392 1133 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CMIPQ8IY22 773 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 SYN2Q92777 582 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 KAT2BQ92831 832 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 TMCO6Q96DC7 493 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ZNF512Q96ME7 567 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 ZSCAN10Q96SZ4 725 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 BPIFA3Q9BQP9 254 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 FOXP1Q9H334 677 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 SAYSD1Q9NPB0 183 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 RRAGDQ9NQL2 400 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 ARHGAP20Q9P2F6 1191 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 GNEQ9Y223 722 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 ERGIC3Q9Y282 383 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ZNF510Q9Y2H8 683 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 PCDHB2Q9Y5E7 798 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 IGF1RP08069 1367 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 D6RAR5 112 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 PGRP06401 933 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 GSPT1P15170 499 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 ENDOUP21128 410 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 CCNE1P24864 410 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms