RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 TBC1D30Q9Y2I9 924 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 F5P12259 2224 aa17.27■□□□□ 0.35
EPHB4-204ENST00000477446 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.26■□□□□ 0.35
EPHB4-204ENST00000477446 MAN2B1O00754 1011 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 FGF10O15520 208 aaPredicted RBP17.26■□□□□ 0.35
EPHB4-204ENST00000477446 KRT14P02533 472 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 ERCC2P18074 760 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 AMPD1P23109 780 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 OR1E1P30953 314 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 CD70P32970 193 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 STARD6P59095 220 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 KDSRQ06136 332 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 SIGLEC14Q08ET2 396 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 GRAMD4Q6IC98 578 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 C1orf228Q6PIY5 440 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 RTL3Q8N8U3 475 aaKnown RBP17.26■□□□□ 0.35
EPHB4-204ENST00000477446 ZNF557Q8N988 423 aaPredicted RBP17.26■□□□□ 0.35
EPHB4-204ENST00000477446 LMLNQ96KR4 655 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 ZNF670Q9BS34 389 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 FOXP3Q9BZS1 431 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 ARHGEF4Q9NR80 690 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 ABCB8Q9NUT2 735 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 DRG1Q9Y295 367 aaKnown RBP17.26■□□□□ 0.35
EPHB4-204ENST00000477446 SLC27A6Q9Y2P4 619 aa17.26■□□□□ 0.35
EPHB4-204ENST00000477446 WASH4PA8MWX3 477 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 SHOX2O60902 331 aaPredicted RBP17.25■□□□□ 0.35
EPHB4-204ENST00000477446 ALADP13716 330 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 KCNJ1P48048 391 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 LMAN2Q12907 356 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 ANKRD20A8PQ5CZ79 823 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 TMEM196Q5HYL7 178 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 ZNF852Q6ZMS4 543 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 ANKS1BQ7Z6G8 1248 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 HOOK3Q86VS8 718 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 FAF2Q96CS3 445 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 SNF8Q96H20 258 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 SHDQ96IW2 340 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 KIAA1522Q9P206 1035 aaPredicted RBP17.25■□□□□ 0.35
EPHB4-204ENST00000477446 ATP8A1Q9Y2Q0 1164 aa17.25■□□□□ 0.35
EPHB4-204ENST00000477446 TTC28Q96AY4 2481 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 DLL1O00548 723 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 KAT7O95251 611 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 MAPKAPK2P49137 400 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 GEN1Q17RS7 908 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 TFDP3Q5H9I0 405 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 C6orf118Q5T5N4 469 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 FSTL4Q6MZW2 842 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 MFSD7Q6UXD7 560 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 KDM7AQ6ZMT4 941 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 SPOCD1Q6ZMY3 1216 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 TRMT10CQ7L0Y3 403 aaKnown RBP17.24■□□□□ 0.35
EPHB4-204ENST00000477446 KIAA0907Q7Z7F0 614 aaPredicted RBP17.24■□□□□ 0.35
EPHB4-204ENST00000477446 SETD3Q86TU7 594 aaPredicted RBP17.24■□□□□ 0.35
EPHB4-204ENST00000477446 VSIG1Q86XK7 387 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 SFTPA1Q8IWL2 248 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.24■□□□□ 0.35
EPHB4-204ENST00000477446 TERB1Q8NA31 727 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 TTC13Q8NBP0 860 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 PCDH19Q8TAB3 1148 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 RNF157Q96PX1 679 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 ETNK2Q9NVF9 386 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 ASIC3Q9UHC3 531 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 GGA2Q9UJY4 613 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 MFHAS1Q9Y4C4 1052 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 NUP205Q92621 2012 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 CHD5Q8TDI0 1954 aa17.24■□□□□ 0.35
EPHB4-204ENST00000477446 A0A0A0MRY4 1105 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 ZNF487B1APH4 448 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 DCLK1O15075 740 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 APODP05090 189 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 IVLP07476 585 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 RHOCP08134 193 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 PABPC1P11940 636 aaKnown RBP17.23■□□□□ 0.35
EPHB4-204ENST00000477446 MZF1P28698 734 aaPredicted RBP17.23■□□□□ 0.35
EPHB4-204ENST00000477446 CSKP41240 450 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 GRIA2P42262 883 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 CDKN2BP42772 138 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 ZNF844Q08AG5 666 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 IFFO1Q0D2I5 559 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 GRSF1Q12849 480 aaKnown RBP eCLIP17.23■□□□□ 0.35
EPHB4-204ENST00000477446 PREPLQ4J6C6 727 aaPredicted RBP17.23■□□□□ 0.35
EPHB4-204ENST00000477446 RNF219Q5W0B1 726 aaPredicted RBP17.23■□□□□ 0.35
EPHB4-204ENST00000477446 DENND2CQ68D51 928 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 TRIM67Q6ZTA4 783 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 SUGP1Q8IWZ8 645 aaKnown RBP17.23■□□□□ 0.35
EPHB4-204ENST00000477446 EZH1Q92800 747 aaPredicted RBP17.23■□□□□ 0.35
EPHB4-204ENST00000477446 TMEM109Q9BVC6 243 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 HEMGNQ9BXL5 484 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 CAPS2Q9BXY5 557 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 INTS6Q9UL03 887 aaKnown RBP17.23■□□□□ 0.35
EPHB4-204ENST00000477446 NDRG2Q9UN36 371 aaKnown RBP17.23■□□□□ 0.35
EPHB4-204ENST00000477446 A0A0D9SEW6 157 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 KANSL1LA0AUZ9 987 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 ILVBLA1L0T0 632 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 TBC1D3BA6NDS4 549 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 PRRT4C9JH25 899 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 NUMBP49757 651 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 OXCT1P55809 520 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 SNX1Q13596 522 aa17.23■□□□□ 0.35
EPHB4-204ENST00000477446 LLGL1Q15334 1064 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms