RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	C21orf59	P57076	290 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	ZBED6	P86452	979 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	GRIK2	Q13002	908 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	SUZ12	Q15022	739 aa	Known RBP	10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	POLD3	Q15054	466 aa	Predicted RBP	10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	TSR1	Q2NL82	804 aa	Known RBP	10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	INAVA	Q3KP66	663 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	TRNP1	Q6NT89	227 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	C22orf39	Q6P5X5	142 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594		Q6ZVU0	165 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	TMC6	Q7Z403	805 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	OR14C36	Q8NHC7	312 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	PIP4K2C	Q8TBX8	421 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	FNIP1	Q8TF40	1166 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	FRS2	Q8WU20	508 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	CASKIN2	Q8WXE0	1202 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	ZNF653	Q96CK0	615 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	ANP32E	Q9BTT0	268 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	ACE2	Q9BYF1	805 aa	Predicted RBP	10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	ADAM33	Q9BZ11	813 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	MTG2	Q9H4K7	406 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	C6orf106	Q9H6K1	298 aa	Predicted RBP	10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	ANLN	Q9NQW6	1124 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	DNAAF2	Q9NVR5	837 aa	Known RBP	10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	PCDHB9	Q9Y5E1	797 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	CNOT1	A5YKK6	2376 aa	Known RBP	10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	DNAH14	Q0VDD8	3507 aa		10.45	□□□□□ -0.74
CCM2-208	ENST00000476594	TBC1D3D	A0A087WVF3	549 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TBC1D3I	A0A087WXS9	549 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TBC1D3E	A0A087X179	549 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TBC1D3K	A0A087X1G2	549 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594		A0A1W2PPC4	97 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	MED19	A0JLT2	244 aa	Predicted RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TBC1D3F	A6NER0	549 aa	Predicted RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TBC1D3L	B9A6J9	549 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	KPNA3	O00505	521 aa	Predicted RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TM4SF5	O14894	197 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	CREB3	O43889	395 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	PRPSAP2	O60256	369 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	DFNA5	O60443	496 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	FTL	P02792	175 aa	Predicted RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	SERPING1	P05155	500 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TBC1D3H	P0C7X1	549 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	ZNF883	P0CG24	379 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	SERPINH1	P50454	418 aa	Known RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	GALC	P54803	685 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	YBEY	P58557	167 aa	Predicted RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	RACK1	P63244	317 aa	Known RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	RAD51	Q06609	339 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	ACAP1	Q15027	740 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	PPP1R15B	Q5SWA1	713 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	SH3PXD2A	Q5TCZ1	1133 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	MANEAL	Q5VSG8	457 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TBC1D3G	Q6DHY5	549 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TBC1D3C	Q6IPX1	549 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	PLEKHA7	Q6IQ23	1121 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	PSAPL1	Q6NUJ1	521 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	NCEH1	Q6PIU2	408 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	ZNF571	Q7Z3V5	609 aa	Predicted RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	PRPF39	Q86UA1	669 aa	Known RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	ZSCAN30	Q86W11	494 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TBC1D3	Q8IZP1	549 aa	Predicted RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	RTL3	Q8N8U3	475 aa	Known RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TMIE	Q8NEW7	156 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	OR7D4	Q8NG98	312 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	BIRC7	Q96CA5	298 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	FAM129B	Q96TA1	746 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	PSMB7	Q99436	277 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TTYH3	Q9C0H2	523 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	NEUROG2	Q9H2A3	272 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	PREB	Q9HCU5	417 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	TMPRSS4	Q9NRS4	437 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	CNOT8	Q9UFF9	292 aa	Known RBP	10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	IL36A	Q9UHA7	158 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	CAPN11	Q9UMQ6	739 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	DMTF1	Q9Y222	760 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	SNX10	Q9Y5X0	201 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	CACNA1E	Q15878	2313 aa		10.44	□□□□□ -0.74
CCM2-208	ENST00000476594	SPTBN2	O15020	2390 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594		A0A0D9SEW6	157 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	TCRBV5S1A1T	A0A578	114 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594		I6L893	689 aa	Predicted RBP	10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	YKT6	O15498	198 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	DAPK3	O43293	454 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	SNAP91	O60641	907 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	GJB6	O95452	261 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	CHRNA3	P32297	505 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	NUMB	P49757	651 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	DNA2	P51530	1060 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	ADPRH	P54922	357 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	TPI1	P60174	286 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	SNRPD1	P62314	119 aa	Known RBP	10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	RPL7A	P62424	266 aa	Known RBP	10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	ZNF252P-AS1	Q0IIN9	211 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	MAMLD1	Q13495	774 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	PARP15	Q460N3	678 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	SETMAR	Q53H47	684 aa	Predicted RBP	10.43	□□□□□ -0.74

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