RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 KLHL30Q0D2K2 578 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 SCAPQ12770 1279 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 SEMA3BQ13214 749 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 POM121L1PQ3SYA9 428 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 PPP1R2P3Q6NXS1 205 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 SCYL2Q6P3W7 929 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 C22orf39Q6P5X5 142 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 LAYNQ6UX15 382 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 ZNF783Q6ZMS7 281 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 SLFN11Q7Z7L1 901 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 DSG4Q86SJ6 1040 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 OR2T34Q8NGX1 318 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 OR14C36Q8NHC7 312 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 SPON2Q9BUD6 331 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 EBF2Q9HAK2 575 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 TM9SF3Q9HD45 589 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 DNAAF2Q9NVR5 837 aaKnown RBP18.35■□□□□ 0.53
UPF3A-203ENST00000474056 TMEM248Q9NWD8 314 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 DNAI1Q9UI46 699 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 PPM1HQ9ULR3 514 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 ACTL7AQ9Y615 435 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 TRPM6Q9BX84 2022 aa18.35■□□□□ 0.53
UPF3A-203ENST00000474056 TPRP12270 2363 aaKnown RBP18.34■□□□□ 0.53
UPF3A-203ENST00000474056 A0A1B0GVT2 93 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 ANKRD62A6NC57 917 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 LRRC72A6NJI9 287 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 C10orf142B7Z368 130 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 C1QTNF3-AMACRE9PGA6 284 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 GOLGA6L19H0YKK7 550 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 ALOX15BO15296 676 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 RHOQP17081 205 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 CD27P26842 260 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 ACVRL1P37023 503 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 MAPKAPK2P49137 400 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 MAMLD1Q13495 774 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 PLEKHA7Q6IQ23 1121 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.34■□□□□ 0.53
UPF3A-203ENST00000474056 OR2A12Q8NGT7 310 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 FAM131CQ96AQ9 280 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 CNPY3Q9BT09 278 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 ZDHHC5Q9C0B5 715 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 FZD10Q9ULW2 581 aa18.34■□□□□ 0.53
UPF3A-203ENST00000474056 A0A1W2PPC4 97 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 RNF103O00237 685 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 RTN2O75298 545 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 ZNF821O75541 412 aaPredicted RBP18.33■□□□□ 0.52
UPF3A-203ENST00000474056 GZMAP12544 262 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 CEACAM1P13688 526 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 CD59P13987 128 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 SERPINH1P50454 418 aaKnown RBP18.33■□□□□ 0.52
UPF3A-203ENST00000474056 CLCN6P51797 869 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 AFF3P51826 1226 aaKnown RBP18.33■□□□□ 0.52
UPF3A-203ENST00000474056 PPP2CBP62714 309 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 PPP2CAP67775 309 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 ZNF252P-AS1Q0IIN9 211 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 CNTN1Q12860 1018 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 EFHC2Q5JST6 749 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 AGBL4Q5VU57 503 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 FAM46CQ5VWP2 391 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 TMC6Q7Z403 805 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 PIP4P1Q86T03 277 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 CHST14Q8NCH0 376 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 ACE2Q9BYF1 805 aaPredicted RBP18.33■□□□□ 0.52
UPF3A-203ENST00000474056 TNKS2Q9H2K2 1166 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 GAREM1Q9H706 876 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 IL21RQ9HBE5 538 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 OSGEPQ9NPF4 335 aa18.33■□□□□ 0.52
UPF3A-203ENST00000474056 UPK3BL1B0FP48 263 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 UPK3BL2E5RIL1 263 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 PLRG1O43660 514 aaKnown RBP18.32■□□□□ 0.52
UPF3A-203ENST00000474056 CD160O95971 181 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 FTLP02792 175 aaPredicted RBP18.32■□□□□ 0.52
UPF3A-203ENST00000474056 PMLP29590 882 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 L1CAMP32004 1257 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 CHRNA3P32297 505 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 GRIA4P48058 902 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 TDRD12Q587J7 1177 aaKnown RBP18.32■□□□□ 0.52
UPF3A-203ENST00000474056 HGSNATQ68CP4 663 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 RETSATQ6NUM9 610 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 ARHGEF2Q92974 986 aaKnown RBP18.32■□□□□ 0.52
UPF3A-203ENST00000474056 ZNF653Q96CK0 615 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 CCDC114Q96M63 670 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 SLC6A18Q96N87 628 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 TRIM7Q9C029 511 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 RETREG1Q9H6L5 497 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 PARVAQ9NVD7 372 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 IFNKQ9P0W0 207 aa18.32■□□□□ 0.52
UPF3A-203ENST00000474056 CNOT8Q9UFF9 292 aaKnown RBP18.32■□□□□ 0.52
UPF3A-203ENST00000474056 FCF1Q9Y324 198 aaKnown RBP18.32■□□□□ 0.52
UPF3A-203ENST00000474056 FARP1Q9Y4F1 1045 aaPredicted RBP18.32■□□□□ 0.52
UPF3A-203ENST00000474056 TBC1D3DA0A087WVF3 549 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 TBC1D3IA0A087WXS9 549 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 TBC1D3EA0A087X179 549 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 TBC1D3KA0A087X1G2 549 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 A0A1W2PQJ5 194 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 TBC1D3FA6NER0 549 aaPredicted RBP18.31■□□□□ 0.52
UPF3A-203ENST00000474056 TBC1D3LB9A6J9 549 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 CREB3O43889 395 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 CER1O95813 267 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 TBC1D3HP0C7X1 549 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms