RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 BYSLQ13895 437 aaKnown RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 CCINQ13939 588 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 POLD3Q15054 466 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 C6orf118Q5T5N4 469 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 MBLAC2Q68D91 279 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 DUPD1Q68J44 220 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 PKN3Q6P5Z2 889 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 ZDHHC24Q6UX98 284 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 LINGO4Q6UY18 593 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 TERB1Q8NA31 727 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 MAGOHBQ96A72 148 aaKnown RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 OXNAD1Q96HP4 312 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 TEKT5Q96M29 485 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 WDR83Q9BRX9 315 aaKnown RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 MLPHQ9BV36 600 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 CEP41Q9BYV8 373 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 FRMD8P1Q9BZ68 369 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 ANKZF1Q9H8Y5 726 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 PLAC1Q9HBJ0 212 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 DNAJC17Q9NVM6 304 aaKnown RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 POLR3BQ9NW08 1133 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 THG1LQ9NWX6 298 aaKnown RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 GRHL1Q9NZI5 618 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 KIAA1522Q9P206 1035 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 KIAA1549LQ6ZVL6 1849 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 MYO10Q9HD67 2058 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 WASH3PC4AMC7 463 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 H0Y626 953 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 DLL1O00548 723 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 INSIG1O15503 277 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 TTI1O43156 1089 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 ATP9BO43861 1147 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 ADAM23O75077 832 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 ADH1CP00326 375 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 EGFP01133 1207 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 PRLP01236 227 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 HLA-DQB2P05538 268 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 CHRNB1P11230 501 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 GLULP15104 373 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 DESP17661 470 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 CHRNA3P32297 505 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 STARD6P59095 220 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 SLC12A1Q13621 1099 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 HNRNPDQ14103 355 aaKnown RBP10.08□□□□□ -0.8
SF3A1-207ENST00000471342 PDK1Q15118 436 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 ANO4Q32M45 955 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 SLC44A4Q53GD3 710 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 TEX44Q53QW1 395 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 INO80DQ53TQ3 878 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-207ENST00000471342 DENND5AQ6IQ26 1287 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 KDELC1Q6UW63 502 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 ZNF534Q76KX8 674 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 JAMLQ86YT9 394 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 LRRC49Q8IUZ0 686 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 CCDC13Q8IYE1 715 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 FAM71DQ8N9W8 422 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 TTC13Q8NBP0 860 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 TSEN2Q8NCE0 465 aaKnown RBP10.08□□□□□ -0.8
SF3A1-207ENST00000471342 ATL2Q8NHH9 583 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 CCDC110Q8TBZ0 833 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 CYB5D2Q8WUJ1 264 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 HTR3CQ8WXA8 447 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 PTPRN2Q92932 1015 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 PSKH2Q96QS6 385 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 KRT12Q99456 494 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 MGME1Q9BQP7 344 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 TRIM51Q9BSJ1 452 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 MAK16Q9BXY0 300 aaKnown RBP10.08□□□□□ -0.8
SF3A1-207ENST00000471342 NEUROG2Q9H2A3 272 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 ZDHHC4Q9NPG8 344 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 ELOVL2Q9NXB9 296 aa10.08□□□□□ -0.8
SF3A1-207ENST00000471342 FARP1Q9Y4F1 1045 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-207ENST00000471342 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-207ENST00000471342 CCDC188H7C350 402 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 DFFAO00273 331 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 NCAM2O15394 837 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 DAPK3O43293 454 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 FZD6O60353 706 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 KAT7O95251 611 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 JCHAINP01591 159 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 CD72P21854 359 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 ADRA1AP35348 466 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 DGKGP49619 791 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 SERPINH1P50454 418 aaKnown RBP10.07□□□□□ -0.8
SF3A1-207ENST00000471342 METAP1P53582 386 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 SKOR1P84550 965 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 OLIG2Q13516 323 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 PTK6Q13882 451 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 DMC1Q14565 340 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 ANKRD20A2Q5SQ80 823 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 C9orf64Q5T6V5 341 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 ANKRD20A1Q5TYW2 823 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 ANKRD20A3Q5VUR7 823 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 ANKRD22Q5VYY1 191 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 EGFLAMQ63HQ2 1017 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 CCDC137Q6PK04 289 aaKnown RBP10.07□□□□□ -0.8
SF3A1-207ENST00000471342 RALGPS2Q86X27 583 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-207ENST00000471342 ZSWIM9Q86XI8 627 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 KLHL7Q8IXQ5 586 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 CPA6Q8N4T0 437 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms