RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 CASS4Q9NQ75 786 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 C8orf4Q9NR00 106 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC38A7Q9NVC3 462 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 MTMR10Q9NXD2 777 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ARHGEF38Q9NXL2 777 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 GDAP2Q9NXN4 497 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SNTG2Q9NY99 539 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 UTP6Q9NYH9 597 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 GTSE1Q9NYZ3 720 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADA2Q9NZK5 511 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 NCKIPSDQ9NZQ3 722 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMEM216Q9P0N5 145 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 CIDEBQ9UHD4 219 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADAMTS6Q9UKP5 1117 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 CNOT11Q9UKZ1 510 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ACOT9Q9Y305 439 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 AP4B1Q9Y6B7 739 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PTCH2Q9Y6C5 1203 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 USP3Q9Y6I4 520 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 NRCAMQ92823 1304 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 EVPLQ92817 2033 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM95CA0A1B0GW59 222 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 E2F8A0AVK6 867 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 ANKRD33BA6NCL7 494 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 CAPN8A6NHC0 703 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 C9IYK1 514 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 G3V2L1 256 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 H3BNX3 289 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 H3BRB1 525 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 M0QZ92 97 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 NFKBIEO00221 500 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 PIRO00625 290 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 DCLK1O15075 740 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 UBDO15205 165 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 FGF10O15520 208 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 PFDN1O60925 122 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 USP2O75604 605 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 TRPA1O75762 1119 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 CNMDO75829 334 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 RECQL4O94761 1208 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 CRTAMO95727 393 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 TOP3BO95985 862 aaKnown RBP3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 C2P06681 752 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 RBP1P09455 135 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF286BP0CG31 522 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 FCGR1AP12314 374 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 KCNE1P15382 129 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 ERCC2P18074 760 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 NFKB1P19838 968 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 CYP2B6P20813 491 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 SAT1P21673 171 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 GLDCP23378 1020 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 ATP5F1P24539 256 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 MPSTP25325 297 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 PCSK1P29120 753 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADORA2AP29274 412 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADRA1BP35368 520 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 GRIA1P42261 906 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 CD151P48509 253 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 LHX1P48742 406 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 NUMBP49757 651 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 ERFP50548 548 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 ATP4BP51164 291 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 CLCN5P51795 746 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 TKTL1P51854 596 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 GJA9P57773 515 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 DNAJB13P59910 316 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 PSME3P61289 254 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 NAA20P61599 178 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 MRPS22P82650 360 aaKnown RBP3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 POU4F1Q01851 419 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 EN1Q05925 392 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 ARHGAP1Q07960 439 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 GALNT2Q10471 571 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC10A2Q12908 348 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 DLG1Q12959 904 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 BNIP2Q12982 314 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZBTB17Q13105 803 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 USP4Q13107 963 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 PDAP1Q13442 181 aaKnown RBP3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 SNAPC2Q13487 334 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 SEPT6Q14141 434 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 PPP2R5DQ14738 602 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 GRM3Q14832 879 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 DGKDQ16760 1214 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC5A9Q2M3M2 681 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 LSM12Q3MHD2 195 aaKnown RBP3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 HSF5Q4G112 596 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 RAB6CQ53S08 254 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 PPM1JQ5JR12 505 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 PCID2Q5JVF3 399 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 GLRA4Q5JXX5 417 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 SAMD4BQ5PRF9 694 aaKnown RBP3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 VWA5B1Q5TIE3 1220 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 IRAK1BP1Q5VVH5 260 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 PRAMEF18Q5VWM3 479 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 FOXB2Q5VYV0 432 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 CES4AQ5XG92 561 aa3.38□□□□□ -1.87
HMGN1P18-201ENST00000457642 BORAQ6PGQ7 559 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms