RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 PCID2Q5JVF3 399 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 MON1AQ86VX9 555 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 C10orf107Q8IVU9 208 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 RTL3Q8N8U3 475 aaKnown RBP16.97■□□□□ 0.31
CCDC43-202ENST00000457422 SPATA22Q8NHS9 363 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 URGCPQ8TCY9 931 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 ZNF778Q96MU6 729 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 MMADHCQ9H3L0 296 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-202ENST00000457422 FAM96AQ9H5X1 160 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 NDFIP2Q9NV92 336 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 OSER1Q9NX31 292 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 SORCS3Q9UPU3 1222 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-202ENST00000457422 PRG3Q9Y2Y8 225 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-202ENST00000457422 HS3ST4Q9Y661 456 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 DOCK4Q8N1I0 1966 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 VWA8A3KMH1 1905 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 PEX11AO75192 247 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 LYPLA1O75608 230 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-202ENST00000457422 SERPINA6P08185 405 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 OR1G1P47890 313 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 GEMP55040 296 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 MLLT6P55198 1093 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-202ENST00000457422 C14orf80Q86SX3 495 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 NUP93Q8N1F7 819 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 SLC39A13Q96H72 371 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 FBXO44Q9H4M3 255 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 RNPEPL1Q9HAU8 725 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 IARS2Q9NSE4 1012 aaKnown RBP16.97■□□□□ 0.31
CCDC43-202ENST00000457422 ZNF358Q9NW07 568 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 TAS2R1Q9NYW7 299 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 ARMCX1Q9P291 453 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 PPARGC1AQ9UBK2 798 aaKnown RBP16.97■□□□□ 0.31
CCDC43-202ENST00000457422 TLR6Q9Y2C9 796 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 DNAJC16Q9Y2G8 782 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 MYLKQ15746 1914 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 A0A096LPK6 155 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 CCDC78A2IDD5 438 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 GYG2O15488 501 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 ANP32DO95626 131 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 RALBP11234 206 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 CPA3P15088 417 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 ALOX15P16050 662 aaPredicted RBP16.96■□□□□ 0.31
CCDC43-202ENST00000457422 GM2AP17900 193 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 ADRA1AP35348 466 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 HARS2P49590 506 aaKnown RBP16.96■□□□□ 0.31
CCDC43-202ENST00000457422 TUBP50607 506 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 DENND5AQ6IQ26 1287 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 PKN3Q6P5Z2 889 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 CNTN4Q8IWV2 1026 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 PLD6Q8N2A8 252 aaKnown RBP16.96■□□□□ 0.31
CCDC43-202ENST00000457422 PTCD2Q8WV60 388 aaKnown RBP16.96■□□□□ 0.31
CCDC43-202ENST00000457422 VPS39Q96JC1 886 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 SORT1Q99523 831 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 GPR22Q99680 433 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 CCDC106Q9BWC9 280 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 MRM3Q9HC36 420 aaKnown RBP16.96■□□□□ 0.31
CCDC43-202ENST00000457422 TBC1D13Q9NVG8 400 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 DNAJB4Q9UDY4 337 aa16.96■□□□□ 0.31
CCDC43-202ENST00000457422 MOXD2PA6NHM9 499 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 SYN3O14994 580 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 MT-CYBP00156 380 aaPredicted RBP16.95■□□□□ 0.3
CCDC43-202ENST00000457422 SLC2A3P11169 496 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 DDR2Q16832 855 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 POTEHQ6S545 545 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 RINLQ6ZS11 566 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 TREML1Q86YW5 311 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 ARHGAP18Q8N392 663 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 ENDOVQ8N8Q3 282 aaKnown RBP16.95■□□□□ 0.3
CCDC43-202ENST00000457422 PPP4R1Q8TF05 950 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 GLT1D1Q96MS3 346 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 EBF4Q9BQW3 602 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 RHOJQ9H4E5 214 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 DENND2DQ9H6A0 471 aaPredicted RBP16.95■□□□□ 0.3
CCDC43-202ENST00000457422 CAB39LQ9H9S4 337 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 ENTPD7Q9NQZ7 604 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 IL37Q9NZH6 218 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 GOLGA8TH3BQL2 631 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 HLA-DQB2P05538 268 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 C2P06681 752 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 MAGEA11P43364 429 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 CCNG1P51959 295 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 ABCE1P61221 599 aaKnown RBP16.95■□□□□ 0.3
CCDC43-202ENST00000457422 SP3Q02447 781 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 TUBB3Q13509 450 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 ANO4Q32M45 955 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 ARMC3Q5W041 872 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 LCA5Q86VQ0 697 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 ZC3HC1Q86WB0 502 aaKnown RBP16.95■□□□□ 0.3
CCDC43-202ENST00000457422 IPMKQ8NFU5 416 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 FATE1Q969F0 183 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 FICDQ9BVA6 458 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 MPP6Q9NZW5 540 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 MCM8Q9UJA3 840 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 C15orf41Q9Y2V0 281 aa16.95■□□□□ 0.3
CCDC43-202ENST00000457422 FAM92AA1XBS5 289 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 G3V2L1 256 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 GRK4P32298 578 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 IRF9Q00978 393 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 DLG2Q15700 870 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms