RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 TBC1D3BA6NDS4 549 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 TBC1D3FA6NER0 549 aaPredicted RBP2.43□□□□□ -2.02
LRCH3-209ENST00000452660 TBC1D3LB9A6J9 549 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 PQBP1O60828 265 aaKnown RBP2.43□□□□□ -2.02
LRCH3-209ENST00000452660 GAGE7O76087 117 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 S100BP04271 92 aaPredicted RBP2.43□□□□□ -2.02
LRCH3-209ENST00000452660 TBC1D3HP0C7X1 549 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 GAGE12FP0CL80 117 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 GAGE12GP0CL81 117 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 GAGE12IP0CL82 117 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 KLRC2P26717 231 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 PPP3CCP48454 512 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 CLCNKBP51801 687 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 ALDH18A1P54886 795 aaKnown RBP2.43□□□□□ -2.02
LRCH3-209ENST00000452660 ZBTB16Q05516 673 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 ST3GAL1Q11201 340 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 GAGE1Q13065 139 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 GAGE4Q13068 117 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 ZNF569Q5MCW4 686 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 TBC1D3GQ6DHY5 549 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 TBC1D3CQ6IPX1 549 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 AADACL2Q6P093 401 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 ZNF771Q7L3S4 317 aaPredicted RBP2.43□□□□□ -2.02
LRCH3-209ENST00000452660 SMIM29Q86T20 159 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 TMEM200AQ86VY9 491 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 RAVER1Q8IY67 606 aaKnown RBP2.43□□□□□ -2.02
LRCH3-209ENST00000452660 TBC1D3Q8IZP1 549 aaPredicted RBP2.43□□□□□ -2.02
LRCH3-209ENST00000452660 RBFAQ8N0V3 343 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 TXLNBQ8N3L3 684 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 SPEM1Q8N4L4 309 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 LRRC57Q8N9N7 239 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 CMASQ8NFW8 434 aaPredicted RBP2.43□□□□□ -2.02
LRCH3-209ENST00000452660 FAM110DQ8TAY7 271 aaPredicted RBP2.43□□□□□ -2.02
LRCH3-209ENST00000452660 MMP28Q9H239 520 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 UBTD1Q9HAC8 227 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 SDF2L1Q9HCN8 221 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 SLC22A11Q9NSA0 550 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 DONSONQ9NYP3 566 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 RAP2CQ9Y3L5 183 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 SAA2-SAA4A0A096LPE2 208 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 A0A1B0GVY2 172 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 FAM172BPA6NC97 362 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 M0QYT0 321 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 HSPB6O14558 160 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 KPNA5O15131 536 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 PAK4O96013 591 aaPredicted RBP2.42□□□□□ -2.02
LRCH3-209ENST00000452660 NPPBP16860 134 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 AMD1P17707 334 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 ITGB8P26012 769 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 EEF1GP26641 437 aaKnown RBP2.42□□□□□ -2.02
LRCH3-209ENST00000452660 C21orf33P30042 268 aaPredicted RBP2.42□□□□□ -2.02
LRCH3-209ENST00000452660 GRSF1Q12849 480 aaKnown RBP eCLIP2.42□□□□□ -2.02
LRCH3-209ENST00000452660 GRM4Q14833 912 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 FCN2Q15485 313 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 SLC35G1Q2M3R5 365 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 PLEKHO1Q53GL0 409 aaPredicted RBP2.42□□□□□ -2.02
LRCH3-209ENST00000452660 DCAF6Q58WW2 860 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 FBXO38Q6PIJ6 1188 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 SLC30A9Q6PML9 568 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 SERPINA11Q86U17 422 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 HORMAD2Q8N7B1 307 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 ANKRD44Q8N8A2 993 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 POC1AQ8NBT0 407 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 ZNF114Q8NC26 417 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 OR1N1Q8NGS0 311 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 TTC8Q8TAM2 541 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 EPYCQ99645 322 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 MMTAG2Q9BU76 263 aaKnown RBP2.42□□□□□ -2.02
LRCH3-209ENST00000452660 APOL5Q9BWW9 433 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 CCDC134Q9H6E4 229 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 EBF2Q9HAK2 575 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 Q9N2J8 555 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 TMEM248Q9NWD8 314 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 ARL15Q9NXU5 204 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 FBXO4Q9UKT5 387 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 TRPC5Q9UL62 973 aaPredicted RBP2.42□□□□□ -2.02
LRCH3-209ENST00000452660 TCF19Q9Y242 345 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 ADAM18Q9Y3Q7 739 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 NFS1Q9Y697 457 aa2.42□□□□□ -2.02
LRCH3-209ENST00000452660 A0A1B0GVM2 712 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 SLC38A8A6NNN8 435 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 TULP2O00295 520 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 ITM2AO43736 263 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 RPP40O75818 363 aaKnown RBP2.41□□□□□ -2.02
LRCH3-209ENST00000452660 THPOP40225 353 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 PCP4P48539 62 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 PRIM2P49643 509 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 TAF6P49848 677 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 MXI1P50539 228 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 CRIP2P52943 208 aaPredicted RBP2.41□□□□□ -2.02
LRCH3-209ENST00000452660 DLG1Q12959 904 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 RAB30Q15771 203 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 KLHL24Q6TFL4 600 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 C9orf139Q6ZV77 190 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 TMEM217Q8N7C4 229 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 NEXN-AS1Q8NBZ9 246 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 CEP76Q8TAP6 659 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 SLC2A12Q8TD20 617 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 FAR1Q8WVX9 515 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 MCRS1Q96EZ8 462 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms