RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SLC18A2Q05940 514 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 GRM1Q13255 1194 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 MADCAM1Q13477 382 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 ADGRE1Q14246 886 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 NBPF12Q5TAG4 269 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-204ENST00000449510 IER5Q5VY09 327 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 ARHGAP17Q68EM7 881 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 KLHL35Q6PF15 583 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 GRIN3AQ8TCU5 1115 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 NXNL1Q96CM4 212 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 SPATA13Q96N96 652 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 SPON2Q9BUD6 331 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 CCDC106Q9BWC9 280 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 IPO11Q9UI26 975 aaKnown RBP12.59□□□□□ -0.39
UBE3B-204ENST00000449510 RAD54BQ9Y620 910 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 HSPA1AP0DMV8 641 aaKnown RBP12.59□□□□□ -0.39
UBE3B-204ENST00000449510 HSPA1BP0DMV9 641 aaKnown RBP12.59□□□□□ -0.39
UBE3B-204ENST00000449510 MAP3K10Q02779 954 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 RGS21Q2M5E4 152 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 MILR1Q7Z6M3 343 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 BEST2Q8NFU1 509 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 OR52K2Q8NGK3 314 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 RP9Q8TA86 221 aaKnown RBP12.59□□□□□ -0.39
UBE3B-204ENST00000449510 ACTRT2Q8TDY3 377 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 ALG9Q9H6U8 611 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 AFF4Q9UHB7 1163 aaKnown RBP12.59□□□□□ -0.39
UBE3B-204ENST00000449510 PNMA8BQ9ULN7 279 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-204ENST00000449510 SNX2O60749 519 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 PTPN1P18031 435 aaKnown RBP12.58□□□□□ -0.39
UBE3B-204ENST00000449510 MAP3K7CLP57077 242 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 GRTP1Q5TC63 336 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 STYK1Q6J9G0 422 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 FBXL19Q6PCT2 694 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 TMEM26Q6ZUK4 368 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 SHCBP1Q8NEM2 672 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 ADCY4Q8NFM4 1077 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 CANT1Q8WVQ1 401 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 LPAR1Q92633 364 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 MAML3Q96JK9 1138 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 ZFYVE19Q96K21 471 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 CPNE1Q99829 537 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 SSU72Q9NP77 194 aaKnown RBP12.58□□□□□ -0.39
UBE3B-204ENST00000449510 ABCB10Q9NRK6 738 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 HOXC10Q9NYD6 342 aa12.58□□□□□ -0.39
UBE3B-204ENST00000449510 A0A1B0GTW7 788 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 DYTNA2CJ06 578 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 VWA5AO00534 786 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 SEPHS1P49903 392 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 KPNA1P52294 538 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-204ENST00000449510 BCAT1P54687 386 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 KCNK10P57789 538 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 SLC6A3Q01959 620 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 GRM3Q14832 879 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 VPS26BQ4G0F5 336 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 DRICH1Q6PGQ1 229 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-204ENST00000449510 CAND1Q86VP6 1230 aaKnown RBP12.58□□□□□ -0.4
UBE3B-204ENST00000449510 SPNS2Q8IVW8 549 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 PPHLN1Q8NEY8 458 aaKnown RBP12.58□□□□□ -0.4
UBE3B-204ENST00000449510 BLOC1S5Q8TDH9 187 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 HTRA1Q92743 480 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 BTBD9Q96Q07 612 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 PEBP4Q96S96 227 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 NAT9Q9BTE0 207 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 QTRT2Q9H974 415 aaKnown RBP12.58□□□□□ -0.4
UBE3B-204ENST00000449510 MID1IP1Q9NPA3 183 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 BARX2Q9UMQ3 279 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-204ENST00000449510 COQ6Q9Y2Z9 468 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 FARP1Q9Y4F1 1045 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-204ENST00000449510 TRIM38O00635 465 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 MGEA5O60502 916 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 PIRTP0C851 137 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 CCDC166P0CW27 439 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 ADRA2BP18089 450 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 SLC18A1P54219 525 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 FBXO16Q8IX29 292 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-204ENST00000449510 FIG4Q92562 907 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 LRRC39Q96DD0 335 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 TBCBQ99426 244 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 DEFB129Q9H1M3 183 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 EPS8L2Q9H6S3 715 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 PNPLA3Q9NST1 481 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 ARHGAP28Q9P2N2 729 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 CDC14AQ9UNH5 594 aa12.58□□□□□ -0.4
UBE3B-204ENST00000449510 PIN4Q9Y237 131 aaKnown RBP12.58□□□□□ -0.4
UBE3B-204ENST00000449510 CCNT2O60583 730 aaKnown RBP12.57□□□□□ -0.4
UBE3B-204ENST00000449510 DEAF1O75398 565 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-204ENST00000449510 KRT8P05787 483 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 AOC1P19801 751 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 NFKB1P19838 968 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 UGT1A1P22309 533 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 UGT1A4P22310 534 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 PCSK6P29122 969 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 UGT1A3P35503 534 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 UGT1A5P35504 534 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 ETV4P43268 484 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 IL5RAQ01344 420 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 SEMA5AQ13591 1074 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 ITGA7Q13683 1181 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 TRIM25Q14258 630 aaKnown RBP12.57□□□□□ -0.4
UBE3B-204ENST00000449510 UGP2Q16851 508 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms