RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CCDC191Q8NCU4 936 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 ADPRHL1Q8NDY3 354 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 BCAS4Q8TDM0 211 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 KCNG4Q8TDN1 519 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 STAMQ92783 540 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 APOPT1Q96IL0 206 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 RADILQ96JH8 1075 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 PIGSQ96S52 555 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 ZNF347Q96SE7 839 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 MPHOSPH8Q99549 860 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 BAG1Q99933 345 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 FAM118BQ9BPY3 351 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 SH2D3AQ9BRG2 576 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 HERC2P3Q9BVR0 1158 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 EIF2B3Q9NR50 452 aaKnown RBP4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 KLHL13Q9P2N7 655 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 CFDP1Q9UEE9 299 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 SLC22A23A1A5C7 686 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 SAC3D1A6NKF1 404 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 C2CD4BA6NLJ0 364 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 E5RJQ4 531 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 GRM8O00222 908 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 TP73O15350 636 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 ALDOCP09972 364 aaKnown RBP4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 HSPA1AP0DMV8 641 aaKnown RBP4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 HSPA1BP0DMV9 641 aaKnown RBP4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 AKR1A1P14550 325 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 CHN1P15882 459 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 ST6GAL1P15907 406 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 TGM2P21980 687 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 GGT5P36269 586 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 ARL3P36405 182 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 PAFAH1B1P43034 410 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 RPP30P78346 268 aaKnown RBP4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 B4GALNT1Q00973 533 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 PDCLQ13371 301 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 ACVR2BQ13705 512 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 BECN1Q14457 450 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 SEMA3AQ14563 771 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 PLCB4Q15147 1175 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBCEQ15813 527 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 EARS2Q5JPH6 523 aaKnown RBP4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 SLC18B1Q6NT16 456 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 DPY19L2P1Q6NXN4 242 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 ATF7IPQ6VMQ6 1270 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 KRT74Q7RTS7 529 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 PXKQ7Z7A4 578 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 ZNF575Q86XF7 245 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 DIS3L2Q8IYB7 885 aaKnown RBP4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 ADSSL1Q8N142 457 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 PAQR4Q8N4S7 273 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 FUZQ9BT04 418 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 ABHD14AQ9BUJ0 271 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 ITPAQ9BY32 194 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 TXLNGYQ9BZA5 131 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 TRIM2Q9C040 744 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 SYNCQ9H7C4 482 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 PDE11AQ9HCR9 933 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 CAMK2AQ9UQM7 478 aa4.81□□□□□ -1.64
HMGB1P48-201ENST00000446155 hCG_1807616A0A1W2PRN6 198 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 NPIPB13A6NJU9 1138 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 NPIPB5A8MRT5 1133 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 NPIPB4C9JG80 1138 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 CLEC3BP05452 202 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 LAMP2P13473 410 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 ACP5P13686 325 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 PRPH2P23942 346 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 PCP4P48539 62 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 ADPRHP54922 357 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 KRT83P78385 493 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 SRSF4Q08170 494 aaKnown RBP4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 MTA1Q13330 715 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 MAMLD1Q13495 774 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 CDC37Q16543 378 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 LRRC24Q50LG9 513 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 ZNF484Q5JVG2 852 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 FAM69AQ5T7M9 428 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 MIS18BP1Q6P0N0 1132 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 DEF8Q6ZN54 512 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 FAM43BQ6ZT52 329 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 YTHDF3Q7Z739 585 aaKnown RBP4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 UEVLDQ8IX04 471 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 C16orf71Q8IYS4 520 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 ENDOVQ8N8Q3 282 aaKnown RBP4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 PIGKQ92643 395 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 CUL5Q93034 780 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 ARRDC3Q96B67 414 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 PRSS22Q9GZN4 317 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 PLEKHA2Q9HB19 425 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 IL21RQ9HBE5 538 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 DIAPH3Q9NSV4 1193 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 MRGBPQ9NV56 204 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBC1D14Q9P2M4 693 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 NAALADL1Q9UQQ1 740 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 SNX8Q9Y5X2 465 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 PIAS3Q9Y6X2 628 aa4.8□□□□□ -1.64
HMGB1P48-201ENST00000446155 MCIDASD6RGH6 385 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 DSCR3O14972 297 aa4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 CNOT3O75175 753 aaKnown RBP4.79□□□□□ -1.64
HMGB1P48-201ENST00000446155 WNT1P04628 370 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms