RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 EIF2B3Q9NR50 452 aaKnown RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 NINJ2Q9NZG7 142 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 ILVBLA1L0T0 632 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 GOLGA6CA6NDK9 693 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 GOLGA6L10A6NI86 522 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 EIF3HO15372 352 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 OPA1O60313 960 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 AVILO75366 819 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 BANF1O75531 89 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 CYBBP04839 570 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 GOLGA6DP0CG33 693 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 CD68P34810 354 aaPredicted RBP9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 ETFBP38117 255 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 IL10RBQ08334 325 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 KCNC3Q14003 757 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 HNRNPDQ14103 355 aaKnown RBP9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 MSS51Q4VC12 460 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 CEP85LQ5SZL2 805 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 RARS2Q5T160 578 aaKnown RBP9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 MARC1Q5VT66 337 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 TPGS1Q6ZTW0 290 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 ANKMY2Q8IV38 441 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 CCDC117Q8IWD4 279 aaPredicted RBP9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 CPXM2Q8N436 756 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 CNTD1Q8N815 330 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 OR7D4Q8NG98 312 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 OR52K2Q8NGK3 314 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 ITFG1Q8TB96 612 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 PYROXD1Q8WU10 500 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 MAML1Q92585 1016 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 FATE1Q969F0 183 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 ZNF419Q96HQ0 510 aaPredicted RBP9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 ZSWIM3Q96MP5 696 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 APOL5Q9BWW9 433 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 EPB41L4BQ9H329 900 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 ATP13A1Q9HD20 1204 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 MED4Q9NPJ6 270 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 GOLGA6AQ9NYA3 693 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 TBC1D30Q9Y2I9 924 aa9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.69□□□□□ -0.86
SMPD4P1-203ENST00000443839 ERICH4A6NGS2 130 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 ERI2A8K979 691 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 E7ESA3 106 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 AGPSO00116 658 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 ALOX15BO15296 676 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 PRAMEF11O60813 436 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 LUC7L3O95232 432 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 PEX11BO96011 259 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 HLA-DQB2P05538 268 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 NUDT17P0C025 328 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 MMP13P45452 471 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 OXCT1P55809 520 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 EIF3BP55884 814 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 SLC10A7Q0GE19 358 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 MPPE1Q53F39 396 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 DNAJC21Q5F1R6 531 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 TCEAL5Q5H9L2 206 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 UBAP2Q5T6F2 1119 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 RNF219Q5W0B1 726 aaPredicted RBP9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 CXorf57Q6NSI4 855 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 LRIG3Q6UXM1 1119 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 LEKR1Q6ZMV7 388 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 CAPN12Q6ZSI9 719 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 OTOP3Q7RTS5 596 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 ARID3BQ8IVW6 561 aaPredicted RBP9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 MFN1Q8IWA4 741 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 PPP1R2P1Q96PQ5 205 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 GLOD4Q9HC38 313 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 CHD5Q8TDI0 1954 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 C2orf16Q68DN1 1984 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 CBX4O00257 560 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 GFRA2O00451 464 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 ANXA9O76027 345 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 AP2A1O95782 977 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 CPP00450 1065 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 GRIA1P42261 906 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 ITKQ08881 620 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 ZNF844Q08AG5 666 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 HYAL1Q12794 435 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 SPARCL1Q14515 664 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 ZNF235Q14590 738 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 CCDC38Q502W7 563 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 MPP7Q5T2T1 576 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 TMCO4Q5TGY1 634 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 ZNF783Q6ZMS7 281 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 CAND1Q86VP6 1230 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 PALM2Q8IXS6 379 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 FBXO36Q8NEA4 188 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 CENPHQ9H3R5 247 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 ZNF576Q9H609 170 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 VPS37BQ9H9H4 285 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 NT5MQ9NPB1 228 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 HAUS2Q9NVX0 235 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 WDR70Q9NW82 654 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 PLK2Q9NYY3 685 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 UBP1Q9NZI7 540 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 VPS28Q9UK41 221 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 CHMP2BQ9UQN3 213 aa9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 AAR2Q9Y312 384 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-203ENST00000443839 PRUNE2Q8WUY3 3088 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms