RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 FNDC3AQ9Y2H6 1198 aaKnown RBP20.55■□□□□ 0.88
LRCH3-208ENST00000443727 SNX11Q9Y5W9 270 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 SYCE3A1L190 88 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 LRRC53A6NM62 1247 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 SLC7A4O43246 635 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 RTN2O75298 545 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 PLEKP08567 350 aaPredicted RBP20.54■□□□□ 0.88
LRCH3-208ENST00000443727 DRD3P35462 400 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 ETFBP38117 255 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 METAP1P53582 386 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 SHC2P98077 582 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 CNTN1Q12860 1018 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 PPP1R2P3Q6NXS1 205 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 IRF2BP2Q7Z5L9 587 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 CCDC185Q8N715 623 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 BAP1Q92560 729 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 SLC6A18Q96N87 628 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 CAMK1GQ96NX5 476 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 DYRK4Q9NR20 520 aa20.54■□□□□ 0.88
LRCH3-208ENST00000443727 TPX2Q9ULW0 747 aaKnown RBP20.54■□□□□ 0.88
LRCH3-208ENST00000443727 TMCO5BA8MYB1 307 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 KPNA3O00505 521 aaPredicted RBP20.53■□□□□ 0.88
LRCH3-208ENST00000443727 SMAD6O43541 496 aaKnown RBP20.53■□□□□ 0.88
LRCH3-208ENST00000443727 ZNF883P0CG24 379 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 RHOQP17081 205 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 GLDCP23378 1020 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 CHRNA3P32297 505 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 DNA2P51530 1060 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 ZNF143P52747 638 aaPredicted RBP20.53■□□□□ 0.88
LRCH3-208ENST00000443727 NRG1Q02297 640 aaPredicted RBP20.53■□□□□ 0.88
LRCH3-208ENST00000443727 SLC20A2Q08357 652 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 CCDC15Q0P6D6 951 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 KLHL40Q2TBA0 621 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 EFHC2Q5JST6 749 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 SFMBT2Q5VUG0 894 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 C22orf39Q6P5X5 142 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 SLFN11Q7Z7L1 901 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 MCOLN2Q8IZK6 566 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 TBC1D31Q96DN5 1066 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 SERAC1Q96JX3 654 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 NAP1L5Q96NT1 182 aaPredicted RBP20.53■□□□□ 0.88
LRCH3-208ENST00000443727 ORAI3Q9BRQ5 295 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 TNKS2Q9H2K2 1166 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 ZNF212Q9UDV6 495 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 DNAI1Q9UI46 699 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 CHD8Q9HCK8 2581 aa20.53■□□□□ 0.88
LRCH3-208ENST00000443727 A0A1B0GTH6 734 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 A0A1W2PQC6 194 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 FAM72CH0Y354 149 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 CCP110O43303 1012 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 LRIG2O94898 1065 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 PRNPP04156 253 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 MAPKAPK2P49137 400 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 RPL7AP62424 266 aaKnown RBP20.52■□□□□ 0.88
LRCH3-208ENST00000443727 SUZ12Q15022 739 aaKnown RBP20.52■□□□□ 0.88
LRCH3-208ENST00000443727 TRIP6Q15654 476 aaKnown RBP20.52■□□□□ 0.88
LRCH3-208ENST00000443727 SLC45A4Q5BKX6 768 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 ARTNQ5T4W7 220 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 FAM72AQ5TYM5 149 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 FAM72DQ6L9T8 149 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 PRPF39Q86UA1 669 aaKnown RBP20.52■□□□□ 0.88
LRCH3-208ENST00000443727 FAM72BQ86X60 149 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 OR2A12Q8NGT7 310 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 GRIN3AQ8TCU5 1115 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 NTAN1Q96AB6 310 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 CNPY3Q9BT09 278 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 KDM4CQ9H3R0 1056 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 RETREG1Q9H6L5 497 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 HPCAL4Q9UM19 191 aa20.52■□□□□ 0.88
LRCH3-208ENST00000443727 KCNK3O14649 394 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 PLRG1O43660 514 aaKnown RBP20.51■□□□□ 0.87
LRCH3-208ENST00000443727 MAT2AP31153 395 aaKnown RBP20.51■□□□□ 0.87
LRCH3-208ENST00000443727 SERPINH1P50454 418 aaKnown RBP20.51■□□□□ 0.87
LRCH3-208ENST00000443727 FAM193AP78312 1265 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 IQCB1Q15051 598 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 MANEALQ5VSG8 457 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 AGBL4Q5VU57 503 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 ZNF354CQ86Y25 554 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 VCPIP1Q96JH7 1222 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 FUCA2Q9BTY2 467 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 MAGEB5Q9BZ81 275 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 CEP44Q9C0F1 390 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 EBF2Q9HAK2 575 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 TAS2R14Q9NYV8 317 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 IL36AQ9UHA7 158 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 CEP295Q9C0D2 2601 aa20.51■□□□□ 0.87
LRCH3-208ENST00000443727 TCRBV5S1A1TA0A578 114 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 VILLO15195 856 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 RAMP2O60895 175 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 ZMPSTE24O75844 475 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 CTSLP07711 333 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 CD38P28907 300 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 ACVRL1P37023 503 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 CTSKP43235 329 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 GEMIN4P57678 1058 aaKnown RBP20.5■□□□□ 0.87
LRCH3-208ENST00000443727 PPP2CBP62714 309 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 PPP2CAP67775 309 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 SCAPQ12770 1279 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 ARSIQ5FYB1 569 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 CHST14Q8NCH0 376 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms