RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 K7ERQ8 282 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 TEX33O43247 280 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 RTN2O75298 545 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 ENDOD1O94919 500 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 MT-CO1P00395 513 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 SERPINC1P01008 464 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 ZNF883P0CG24 379 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 TNFAIP3P21580 790 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 RFC1P35251 1148 aaPredicted RBP20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 DRD3P35462 400 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 CCT8P50990 548 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 DNA2P51530 1060 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 CCR5P51681 352 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 METAP1P53582 386 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 GSCP56915 257 aaPredicted RBP20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 BNC1Q01954 994 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 GNA12Q03113 381 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 CCDC15Q0P6D6 951 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 CNTN1Q12860 1018 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 TRIP6Q15654 476 aaKnown RBP20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 ASIC2Q16515 512 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 RAB6CQ53S08 254 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 EFHC2Q5JST6 749 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 SCYL2Q6P3W7 929 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 MON1BQ7L1V2 547 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 ZNF354CQ86Y25 554 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 TBC1D31Q96DN5 1066 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 SERAC1Q96JX3 654 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 RAB6CQ9H0N0 254 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 SARDHQ9UL12 918 aa20.31■□□□□ 0.84
SHROOM1-204ENST00000440118 FLRT2O43155 660 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 PRNPP04156 253 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 SPINK2P20155 84 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 GLDCP23378 1020 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 CHRNA3P32297 505 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 PTP4A2Q12974 167 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 ST3GAL2Q16842 350 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 INAVAQ3KP66 663 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 PPP1R2P3Q6NXS1 205 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 PRPF39Q86UA1 669 aaKnown RBP20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 CCDC185Q8N715 623 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 PPP1R16AQ96I34 528 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 TNKS2Q9H2K2 1166 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 RTN4Q9NQC3 1192 aaKnown RBP20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 PPM1HQ9ULR3 514 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 HPCAL4Q9UM19 191 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 MYO6Q9UM54 1294 aa20.3■□□□□ 0.84
SHROOM1-204ENST00000440118 LRRC53A6NM62 1247 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 SIGLEC16A6NMB1 481 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 TMCO5BA8MYB1 307 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 PLRG1O43660 514 aaKnown RBP20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 PLEKP08567 350 aaPredicted RBP20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 RHOQP17081 205 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 CD38P28907 300 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 MAT2AP31153 395 aaKnown RBP20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 MAPKAPK2P49137 400 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 SERPINH1P50454 418 aaKnown RBP20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 HDAC4P56524 1084 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 PPP2CBP62714 309 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 PPP2CAP67775 309 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 ZNF423Q2M1K9 1284 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 WDR59Q6PJI9 974 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 SLFN11Q7Z7L1 901 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 OSBPL2Q9H1P3 480 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 KDM4CQ9H3R0 1056 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 IL36AQ9UHA7 158 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 DNAI1Q9UI46 699 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 PCDHGB2Q9Y5G2 931 aa20.29■□□□□ 0.84
SHROOM1-204ENST00000440118 DOCK9Q9BZ29 2069 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 SYCE3A1L190 88 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 KCNK3O14649 394 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 VILLO15195 856 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 CCP110O43303 1012 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 SMAD6O43541 496 aaKnown RBP20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 HYAL3O43820 417 aaPredicted RBP20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 RAMP2O60895 175 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 LRIG2O94898 1065 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 TRIM16O95361 564 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 ZNF143P52747 638 aaPredicted RBP20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 GEMIN4P57678 1058 aaKnown RBP20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 FAM193AP78312 1265 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 IL9RQ01113 521 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 NRG1Q02297 640 aaPredicted RBP20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 SETMARQ53H47 684 aaPredicted RBP20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 AGBL4Q5VU57 503 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 SFMBT2Q5VUG0 894 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 ACAD10Q6JQN1 1059 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 RYBPQ8N488 228 aaPredicted RBP20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 OR2A12Q8NGT7 310 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 RHBDD1Q8TEB9 315 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 NTAN1Q96AB6 310 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 ORAI3Q9BRQ5 295 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 SCNM1Q9BWG6 230 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 CEP44Q9C0F1 390 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 GDF3Q9NR23 364 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 CHD5Q8TDI0 1954 aa20.28■□□□□ 0.84
SHROOM1-204ENST00000440118 H0Y8X5 98 aa20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 DFNA5O60443 496 aa20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 TOP3BO95985 862 aaKnown RBP20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 NUDT1P36639 197 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms