RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PLEKP08567 350 aaPredicted RBP18.85■□□□□ 0.61
GPC1-205ENST00000427506 RHOQP17081 205 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 CCR5P51681 352 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 CLCN6P51797 869 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 RACK1P63244 317 aaKnown RBP18.85■□□□□ 0.61
GPC1-205ENST00000427506 NRG1Q02297 640 aaPredicted RBP18.85■□□□□ 0.61
GPC1-205ENST00000427506 HNRNPDQ14103 355 aaKnown RBP18.85■□□□□ 0.61
GPC1-205ENST00000427506 IQCB1Q15051 598 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 PPP1R2P3Q6NXS1 205 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 SLFN11Q7Z7L1 901 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 MCOLN2Q8IZK6 566 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 SETD7Q8WTS6 366 aaKnown RBP18.85■□□□□ 0.61
GPC1-205ENST00000427506 SKA1Q96BD8 255 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 TBC1D31Q96DN5 1066 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 SLC6A18Q96N87 628 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 NAP1L5Q96NT1 182 aaPredicted RBP18.85■□□□□ 0.61
GPC1-205ENST00000427506 CAMK1GQ96NX5 476 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 FUCA2Q9BTY2 467 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 ACE2Q9BYF1 805 aaPredicted RBP18.85■□□□□ 0.61
GPC1-205ENST00000427506 TNKS2Q9H2K2 1166 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 AASDHPPTQ9NRN7 309 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 ZNF212Q9UDV6 495 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 DNAI1Q9UI46 699 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 NUMA1Q14980 2115 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 A0A1B0GTH6 734 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 FAM72CH0Y354 149 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 KPNA3O00505 521 aaPredicted RBP18.84■□□□□ 0.61
GPC1-205ENST00000427506 SLC7A4O43246 635 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 CCP110O43303 1012 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 CHRNA3P32297 505 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 ETFBP38117 255 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 ZNF143P52747 638 aaPredicted RBP18.84■□□□□ 0.61
GPC1-205ENST00000427506 SHC2P98077 582 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 CNTN1Q12860 1018 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 ARTNQ5T4W7 220 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 FAM72AQ5TYM5 149 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 SFMBT2Q5VUG0 894 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 FAM72DQ6L9T8 149 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 C22orf39Q6P5X5 142 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 FAM72BQ86X60 149 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 OR2A12Q8NGT7 310 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 NTAN1Q96AB6 310 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 ORAI3Q9BRQ5 295 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 MAGEB5Q9BZ81 275 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 RETREG1Q9H6L5 497 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 DYRK4Q9NR20 520 aa18.84■□□□□ 0.61
GPC1-205ENST00000427506 TPX2Q9ULW0 747 aaKnown RBP18.84■□□□□ 0.61
GPC1-205ENST00000427506 FNDC3AQ9Y2H6 1198 aaKnown RBP18.84■□□□□ 0.61
GPC1-205ENST00000427506 KCNK3O14649 394 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 LRIG2O94898 1065 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 ZNF883P0CG24 379 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 MAPKAPK2P49137 400 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 DNA2P51530 1060 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 RPL7AP62424 266 aaKnown RBP18.83■□□□□ 0.6
GPC1-205ENST00000427506 SLC20A2Q08357 652 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 CCDC15Q0P6D6 951 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 TRIP6Q15654 476 aaKnown RBP18.83■□□□□ 0.6
GPC1-205ENST00000427506 EFHC2Q5JST6 749 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 MANEALQ5VSG8 457 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 PRPF39Q86UA1 669 aaKnown RBP18.83■□□□□ 0.6
GPC1-205ENST00000427506 SERAC1Q96JX3 654 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 CNPY3Q9BT09 278 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 KDM4CQ9H3R0 1056 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 HAUS4Q9H6D7 363 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 EBF2Q9HAK2 575 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 CBX8Q9HC52 389 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 TMEM248Q9NWD8 314 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 TAS2R14Q9NYV8 317 aa18.83■□□□□ 0.6
GPC1-205ENST00000427506 NYNRINQ9P2P1 1898 aaKnown RBP18.83■□□□□ 0.6
GPC1-205ENST00000427506 CNOT1A5YKK6 2376 aaKnown RBP18.83■□□□□ 0.6
GPC1-205ENST00000427506 ASCC3Q8N3C0 2202 aaKnown RBP18.82■□□□□ 0.6
GPC1-205ENST00000427506 TCRBV5S1A1TA0A578 114 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 VILLO15195 856 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 PLRG1O43660 514 aaKnown RBP18.82■□□□□ 0.6
GPC1-205ENST00000427506 ZMPSTE24O75844 475 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 PRNPP04156 253 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 CTSLP07711 333 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 PTMSP20962 102 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 CD38P28907 300 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 MAT2AP31153 395 aaKnown RBP18.82■□□□□ 0.6
GPC1-205ENST00000427506 ACVRL1P37023 503 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 SERPINH1P50454 418 aaKnown RBP18.82■□□□□ 0.6
GPC1-205ENST00000427506 PPP2CBP62714 309 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 PPP2CAP67775 309 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 FAM193AP78312 1265 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 KLHL30Q0D2K2 578 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 NR1I3Q14994 352 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 SUZ12Q15022 739 aaKnown RBP18.82■□□□□ 0.6
GPC1-205ENST00000427506 SLC45A4Q5BKX6 768 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 LUZP1Q86V48 1076 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 NLRP14Q86W24 1093 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 ZNF354CQ86Y25 554 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 PYROXD2Q8N2H3 581 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 CHST14Q8NCH0 376 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 TMIEQ8NEW7 156 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 GRIN3AQ8TCU5 1115 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 VCPIP1Q96JH7 1222 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 SYT11Q9BT88 431 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 CEP44Q9C0F1 390 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 NDFIP2Q9NV92 336 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms