RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PRAMEF4O60810 478 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 SEC24DO94855 1032 aaPredicted RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 CCNE2O96020 404 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 RHOP08100 348 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 CBSLP0DN79 551 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 PTPN2P17706 415 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 CBSP35520 551 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 ATXN3P54252 364 aaPredicted RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 NCBP1Q09161 790 aaKnown RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 ITGB3BPQ13352 177 aaPredicted RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 PSMD5Q16401 504 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 UBE2SQ16763 222 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 PLK5Q496M5 336 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 PRSS55Q6UWB4 352 aaPredicted RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 Q6ZS52 159 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 RTL10Q7L3V2 364 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 HAUS6Q7Z4H7 955 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 ZNF410Q86VK4 478 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 RHPN2Q8IUC4 686 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 SMAP1Q8IYB5 467 aaPredicted RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 COLGALT2Q8IYK4 626 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 HACE1Q8IYU2 909 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 RNF168Q8IYW5 571 aaPredicted RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 ELMOD1Q8N336 334 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 HDDC3Q8N4P3 179 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 CHCHD4Q8N4Q1 142 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 CAMKK1Q8N5S9 505 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 CTCFLQ8NI51 663 aaPredicted RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 MBOAT7Q96N66 472 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 HNRNPABQ99729 332 aaKnown RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 NUSAP1Q9BXS6 441 aaKnown RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 C8orf33Q9H7E9 229 aaPredicted RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 CPNE5Q9HCH3 593 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 KLHL11Q9NVR0 708 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 DNMT3BQ9UBC3 853 aaKnown RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 GABBR1Q9UBS5 961 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 G3BP2Q9UN86 482 aaKnown RBP5.35□□□□□ -1.55
SFXN1-202ENST00000421887 PCDHA10Q9Y5I2 948 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 RAI2Q9Y5P3 530 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 VWA8A3KMH1 1905 aa5.35□□□□□ -1.55
SFXN1-202ENST00000421887 KIF26AQ9ULI4 1882 aaPredicted RBP5.34□□□□□ -1.55
SFXN1-202ENST00000421887 HELZ2Q9BYK8 2649 aaKnown RBP5.34□□□□□ -1.55
SFXN1-202ENST00000421887 A0A1W2PR48 441 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 WIPF3A6NGB9 483 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 ARL5CA6NH57 179 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 SPECC1L-ADORA2AF8WAN1 911 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 IPO5O00410 1097 aaKnown RBP5.34□□□□□ -1.55
SFXN1-202ENST00000421887 IFIT3O14879 490 aaKnown RBP5.34□□□□□ -1.55
SFXN1-202ENST00000421887 NRP2O60462 931 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 ERLIN2O94905 339 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 POU2F2P09086 479 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 ELF1P32519 619 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 MLH1P40692 756 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 NRG3P56975 720 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 HNRNPDQ14103 355 aaKnown RBP5.34□□□□□ -1.55
SFXN1-202ENST00000421887 PON2Q15165 354 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 FAM78AQ5JUQ0 283 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 CYP4A22Q5TCH4 519 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 FAM171A1Q5VUB5 890 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 VITQ6UXI7 678 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 PDZD4Q76G19 769 aaPredicted RBP5.34□□□□□ -1.55
SFXN1-202ENST00000421887 ZNF589Q86UQ0 364 aaPredicted RBP5.34□□□□□ -1.55
SFXN1-202ENST00000421887 C11orf74Q86VG3 221 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 RALGPS2Q86X27 583 aaPredicted RBP5.34□□□□□ -1.55
SFXN1-202ENST00000421887 TICAM2Q86XR7 235 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 RHOT2Q8IXI1 618 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 ZZZ3Q8IYH5 903 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 SMARCD2Q92925 531 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 PTCD3Q96EY7 689 aaKnown RBP5.34□□□□□ -1.55
SFXN1-202ENST00000421887 NLRP4Q96MN2 994 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 UROC1Q96N76 676 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 FCRL4Q96PJ5 515 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 GAD1Q99259 594 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 LZTS2Q9BRK4 669 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 ZNF577Q9BSK1 485 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 SPZ1Q9BXG8 430 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 TRIM6Q9C030 488 aaPredicted RBP5.34□□□□□ -1.55
SFXN1-202ENST00000421887 DCTPP1Q9H773 170 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 TBC1D22BQ9NU19 505 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 AGPAT5Q9NUQ2 364 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 DMTF1Q9Y222 760 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 SPO11Q9Y5K1 396 aa5.34□□□□□ -1.55
SFXN1-202ENST00000421887 COL4A2P08572 1712 aa5.34□□□□□ -1.56
SFXN1-202ENST00000421887 ACACAQ13085 2346 aa5.34□□□□□ -1.56
SFXN1-202ENST00000421887 NBEAQ8NFP9 2946 aa5.34□□□□□ -1.56
SFXN1-202ENST00000421887 URB1O60287 2271 aaKnown RBP5.34□□□□□ -1.56
SFXN1-202ENST00000421887 DSPP15924 2871 aaKnown RBP5.34□□□□□ -1.56
SFXN1-202ENST00000421887 PI4KAP42356 2102 aa5.33□□□□□ -1.56
SFXN1-202ENST00000421887 LOC400499M0QZD8 3231 aa5.33□□□□□ -1.56
SFXN1-202ENST00000421887 ADAMTS9Q9P2N4 1935 aa5.33□□□□□ -1.56
SFXN1-202ENST00000421887 F8W810 466 aa5.33□□□□□ -1.56
SFXN1-202ENST00000421887 CDX4O14627 284 aaPredicted RBP5.33□□□□□ -1.56
SFXN1-202ENST00000421887 PRRG1O14668 218 aa5.33□□□□□ -1.56
SFXN1-202ENST00000421887 EXTL3O43909 919 aa5.33□□□□□ -1.56
SFXN1-202ENST00000421887 ITGA10O75578 1167 aa5.33□□□□□ -1.56
SFXN1-202ENST00000421887 PDGFRBP09619 1106 aa5.33□□□□□ -1.56
SFXN1-202ENST00000421887 CEBPBP17676 345 aa5.33□□□□□ -1.56
SFXN1-202ENST00000421887 SMARCA1P28370 1054 aa5.33□□□□□ -1.56
SFXN1-202ENST00000421887 OR1D2P34982 312 aa5.33□□□□□ -1.56
SFXN1-202ENST00000421887 IGFALSP35858 605 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms