RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 OTUD4Q01804 1114 aaKnown RBP17.9■□□□□ 0.46
LINC00271-201ENST00000421378 IL10RBQ08334 325 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 FZD5Q13467 585 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 FNDC3BQ53EP0 1204 aaKnown RBP17.9■□□□□ 0.46
LINC00271-201ENST00000421378 SERPINA13PQ6UXR4 307 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 Q6ZS52 159 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 TRMT11Q7Z4G4 463 aaKnown RBP17.9■□□□□ 0.46
LINC00271-201ENST00000421378 ADAT2Q7Z6V5 191 aaKnown RBP17.9■□□□□ 0.46
LINC00271-201ENST00000421378 RASGEF1CQ8N431 466 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 ATP11CQ8NB49 1132 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 TTC13Q8NBP0 860 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 CCNYQ8ND76 341 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 RPLP0P6Q8NHW5 317 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 ACTL9Q8TC94 416 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 USP33Q8TEY7 942 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 MRGPRX3Q96LB0 322 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 PDFQ9HBH1 243 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 MT-CO1P00395 513 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 SLC20A2Q08357 652 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 PPIDQ08752 370 aaKnown RBP17.89■□□□□ 0.45
LINC00271-201ENST00000421378 NOMO1Q15155 1222 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 LONRF2Q1L5Z9 754 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 TIGD7Q6NT04 549 aaPredicted RBP17.89■□□□□ 0.45
LINC00271-201ENST00000421378 LEKR1Q6ZMV7 388 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 ZC3H18Q86VM9 953 aaKnown RBP17.89■□□□□ 0.45
LINC00271-201ENST00000421378 SH2D3CQ8N5H7 860 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 ALLCQ8N6M5 410 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 IL17RCQ8NAC3 791 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 KDM1BQ8NB78 822 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 CLDN23Q96B33 292 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 MYO19Q96H55 970 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 MS4A14Q96JA4 679 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 ACOX2Q99424 681 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 LGMNQ99538 433 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 CACNA2D2Q9NY47 1150 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 UBA2Q9UBT2 640 aaPredicted RBP17.89■□□□□ 0.45
LINC00271-201ENST00000421378 SLCO3A1Q9UIG8 710 aa17.89■□□□□ 0.45
LINC00271-201ENST00000421378 PGRMC1O00264 195 aaKnown RBP17.88■□□□□ 0.45
LINC00271-201ENST00000421378 MCF2LO15068 1137 aa17.88■□□□□ 0.45
LINC00271-201ENST00000421378 ZNF185O15231 689 aa17.88■□□□□ 0.45
LINC00271-201ENST00000421378 IL12RB1P42701 662 aa17.88■□□□□ 0.45
LINC00271-201ENST00000421378 RPS9P46781 194 aaKnown RBP17.88■□□□□ 0.45
LINC00271-201ENST00000421378 VASPP50552 380 aaPredicted RBP17.88■□□□□ 0.45
LINC00271-201ENST00000421378 CLCN6P51797 869 aa17.88■□□□□ 0.45
LINC00271-201ENST00000421378 HSF5Q4G112 596 aaPredicted RBP17.88■□□□□ 0.45
LINC00271-201ENST00000421378 METTL3Q86U44 580 aaKnown RBP17.88■□□□□ 0.45
LINC00271-201ENST00000421378 TXNDC5Q8NBS9 432 aaKnown RBP17.88■□□□□ 0.45
LINC00271-201ENST00000421378 MAIP1Q8WWC4 291 aa17.88■□□□□ 0.45
LINC00271-201ENST00000421378 TSGA13Q96PP4 275 aa17.88■□□□□ 0.45
LINC00271-201ENST00000421378 NAP1L3Q99457 506 aaPredicted RBP17.88■□□□□ 0.45
LINC00271-201ENST00000421378 FAM118BQ9BPY3 351 aa17.88■□□□□ 0.45
LINC00271-201ENST00000421378 BRD8Q9H0E9 1235 aa17.88■□□□□ 0.45
LINC00271-201ENST00000421378 TMEM245Q9H330 911 aa17.88■□□□□ 0.45
LINC00271-201ENST00000421378 EPHX3Q9H6B9 360 aa17.88■□□□□ 0.45
LINC00271-201ENST00000421378 TTC7AQ9ULT0 858 aaPredicted RBP17.88■□□□□ 0.45
LINC00271-201ENST00000421378 SLC8A2Q9UPR5 921 aa17.88■□□□□ 0.45
LINC00271-201ENST00000421378 ACTL7AQ9Y615 435 aa17.88■□□□□ 0.45
LINC00271-201ENST00000421378 K7ERQ8 282 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 KLF8O95600 359 aaPredicted RBP17.87■□□□□ 0.45
LINC00271-201ENST00000421378 CD160O95971 181 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 DCNP07585 359 aaKnown RBP17.87■□□□□ 0.45
LINC00271-201ENST00000421378 SRCP12931 536 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 AOC1P19801 751 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 CCNCP24863 283 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 NTSR1P30989 418 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 ZNF33AQ06730 810 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 AP1B1Q10567 949 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 XRCC4Q13426 336 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 ENPP2Q13822 863 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 ACCSLQ4AC99 568 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 INO80DQ53TQ3 878 aaPredicted RBP17.87■□□□□ 0.45
LINC00271-201ENST00000421378 SDE2Q6IQ49 451 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 ACTRT1Q8TDG2 376 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 LRRN4Q8WUT4 740 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 NSMCE1Q8WV22 266 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 TFB1MQ8WVM0 346 aaKnown RBP17.87■□□□□ 0.45
LINC00271-201ENST00000421378 CASKIN2Q8WXE0 1202 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 PBXIP1Q96AQ6 731 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 ZNF599Q96NL3 588 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 CHRDQ9H2X0 955 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 R3HDM2Q9Y2K5 976 aaKnown RBP17.87■□□□□ 0.45
LINC00271-201ENST00000421378 STON1Q9Y6Q2 735 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 SHROOM3Q8TF72 1996 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 MYO18AQ92614 2054 aaKnown RBP17.87■□□□□ 0.45
LINC00271-201ENST00000421378 ATG2BQ96BY7 2078 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 WASH3PC4AMC7 463 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 SMAD6O43541 496 aaKnown RBP17.87■□□□□ 0.45
LINC00271-201ENST00000421378 ATP9BO43861 1147 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 TMCC1O94876 653 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 PRKCHP24723 683 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 EIF3EP60228 445 aaKnown RBP17.87■□□□□ 0.45
LINC00271-201ENST00000421378 RFTN1Q14699 578 aaPredicted RBP17.87■□□□□ 0.45
LINC00271-201ENST00000421378 TMCO4Q5TGY1 634 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 CCDC13Q8IYE1 715 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 ZNF366Q8N895 744 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 ZNF592Q92610 1267 aa17.87■□□□□ 0.45
LINC00271-201ENST00000421378 FCF1Q9Y324 198 aaKnown RBP17.87■□□□□ 0.45
LINC00271-201ENST00000421378 TTC34A8MYJ7 566 aa17.86■□□□□ 0.45
LINC00271-201ENST00000421378 HACD1B0YJ81 288 aa17.86■□□□□ 0.45
LINC00271-201ENST00000421378 CHURC1-FNTBB4DL54 471 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms