RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 KDELR3O43731 214 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 NNMTP40261 264 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 CDH6P55285 790 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 CCZ1BP86790 482 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 CCZ1P86791 482 aaPredicted RBP19.05■□□□□ 0.64
PTCD3-204ENST00000418628 SLC20A2Q08357 652 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 ELAVL3Q14576 367 aaKnown RBP19.05■□□□□ 0.64
PTCD3-204ENST00000418628 PDK2Q15119 407 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 DLG2Q15700 870 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 RETSATQ6NUM9 610 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 C22orf39Q6P5X5 142 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 LINGO4Q6UY18 593 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 LRRC8AQ8IWT6 810 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 VOPP1Q96AW1 172 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 ERLEC1Q96DZ1 483 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 FAM129BQ96TA1 746 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 DESI2Q9BSY9 194 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 CEP44Q9C0F1 390 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 BCCIPQ9P287 314 aaKnown RBP eCLIP19.05■□□□□ 0.64
PTCD3-204ENST00000418628 MBD1Q9UIS9 605 aaPredicted RBP19.05■□□□□ 0.64
PTCD3-204ENST00000418628 SMG5Q9UPR3 1016 aaKnown RBP19.05■□□□□ 0.64
PTCD3-204ENST00000418628 MFHAS1Q9Y4C4 1052 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 DUSP10Q9Y6W6 482 aa19.05■□□□□ 0.64
PTCD3-204ENST00000418628 PCDH15Q96QU1 1955 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 IGHV1OR15-9A0A0B4J2B8 117 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 A0A0U1RQJ8 604 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 PRR23AA6NEV1 266 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 ZSCAN5CA6NGD5 496 aaPredicted RBP19.04■□□□□ 0.64
PTCD3-204ENST00000418628 ALOX15BO15296 676 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 ARHGAP6O43182 974 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 BCKDHBP21953 392 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 COMTP21964 271 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 AMPD1P23109 780 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 MRE11P49959 708 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 RPS14P62263 151 aaKnown RBP19.04■□□□□ 0.64
PTCD3-204ENST00000418628 ZBTB16Q05516 673 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 IL31Q6EBC2 164 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 LZTR1Q8N653 840 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 FAM131CQ96AQ9 280 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 SPON2Q9BUD6 331 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 SLC39A8Q9C0K1 460 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 GOLPH3Q9H4A6 298 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 KLHL11Q9NVR0 708 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 ACTL7AQ9Y615 435 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 ALG6Q9Y672 507 aa19.04■□□□□ 0.64
PTCD3-204ENST00000418628 TMEM131Q92545 1883 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 C10orf142B7Z368 130 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 PSTPIP1O43586 416 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 ZNF217O75362 1048 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 GEMIN4P57678 1058 aaKnown RBP19.03■□□□□ 0.64
PTCD3-204ENST00000418628 MMRN1Q13201 1228 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 PLK5Q496M5 336 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 USP39Q53GS9 565 aaKnown RBP19.03■□□□□ 0.64
PTCD3-204ENST00000418628 ZNF776Q68DI1 518 aaPredicted RBP19.03■□□□□ 0.64
PTCD3-204ENST00000418628 Q6ZVU0 165 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 C11orf74Q86VG3 221 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 FRMD1Q8N878 549 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 LRRC57Q8N9N7 239 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 PCDH19Q8TAB3 1148 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 RAPGEF5Q92565 580 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 NKD2Q969F2 451 aaPredicted RBP19.03■□□□□ 0.64
PTCD3-204ENST00000418628 ISG20Q96AZ6 181 aaKnown RBP19.03■□□□□ 0.64
PTCD3-204ENST00000418628 SIPA1Q96FS4 1042 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 CELF6Q96J87 481 aaKnown RBP19.03■□□□□ 0.64
PTCD3-204ENST00000418628 PDLIM2Q96JY6 352 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 DUSP15Q9H1R2 295 aaPredicted RBP19.03■□□□□ 0.64
PTCD3-204ENST00000418628 ITM2CQ9NQX7 267 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 ADGRG1Q9Y653 693 aa19.03■□□□□ 0.64
PTCD3-204ENST00000418628 PTPRZ1P23471 2315 aaPredicted RBP19.03■□□□□ 0.64
PTCD3-204ENST00000418628 MCF2LO15068 1137 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 PRAMEF11O60813 436 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 KDELR1P24390 212 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 GJC1P36383 396 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 SSR1P43307 286 aaKnown RBP19.02■□□□□ 0.64
PTCD3-204ENST00000418628 NOP2P46087 812 aaKnown RBP19.02■□□□□ 0.64
PTCD3-204ENST00000418628 TPMTP51580 245 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 SIM2Q14190 667 aaPredicted RBP19.02■□□□□ 0.64
PTCD3-204ENST00000418628 KRT81Q14533 505 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 TAZQ16635 292 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 ANKRD20A8PQ5CZ79 823 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 PMS2CLQ68D20 193 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 NCBP2-AS2Q69YL0 99 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 KIAA1324Q6UXG2 1013 aaKnown RBP19.02■□□□□ 0.64
PTCD3-204ENST00000418628 KBTBD6Q86V97 674 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 TP53INP2Q8IXH6 220 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 RHOT1Q8IXI2 618 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 PLPP6Q8IY26 295 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 STK40Q8N2I9 435 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 FAM160A2Q8N612 972 aaPredicted RBP19.02■□□□□ 0.64
PTCD3-204ENST00000418628 PCDH20Q8N6Y1 951 aaKnown RBP19.02■□□□□ 0.64
PTCD3-204ENST00000418628 PQLC3Q8N755 202 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 ATP11CQ8NB49 1132 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 OR2A12Q8NGT7 310 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 CASKIN2Q8WXE0 1202 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 RLN3Q8WXF3 142 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 PRCCQ92733 491 aaPredicted RBP19.02■□□□□ 0.64
PTCD3-204ENST00000418628 SPACA7Q96KW9 195 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 HYOU1Q9Y4L1 999 aa19.02■□□□□ 0.64
PTCD3-204ENST00000418628 ARHGAP42A6NI28 874 aa19.01■□□□□ 0.63
PTCD3-204ENST00000418628 DAPK3O43293 454 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms