RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SLC22A23A1A5C7 686 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 C2CD4BA6NLJ0 364 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 KCNU1A8MYU2 1149 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 GRM8O00222 908 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 TP73O15350 636 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 PRR35P0CG20 571 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 HSD3B1P14060 373 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 TNNT2P45379 298 aaPredicted RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 RPS13P62277 151 aaKnown RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 HMGN5P82970 282 aaKnown RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 B4GALNT1Q00973 533 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 CFHR1Q03591 330 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 ZNF91Q05481 1191 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 STIM1Q13586 685 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 RAPGEF1Q13905 1077 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 DAZAP2Q15038 168 aaPredicted RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 PWP2Q15269 919 aaKnown RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 CCDC142Q17RM4 750 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 SLC9C1Q4G0N8 1177 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 LRRC24Q50LG9 513 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 EARS2Q5JPH6 523 aaKnown RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 FBXO47Q5MNV8 452 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 LIPMQ5VYY2 423 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 CASC1Q6TDU7 716 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 SASS6Q6UVJ0 657 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 KIAA1324Q6UXG2 1013 aaKnown RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 RASGRP2Q7LDG7 609 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 UBE2Q1Q7Z7E8 422 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 CHD1LQ86WJ1 897 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 ITPRIPQ8IWB1 547 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 SRRM1Q8IYB3 904 aaKnown RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 ADGRF4Q8IZF3 695 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 CPXCR1Q8N123 301 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 TMEM57Q8N5G2 664 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 PTGR2Q8N8N7 351 aaPredicted RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 ENDOVQ8N8Q3 282 aaKnown RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 FAM47BQ8NA70 645 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 FAM184AQ8NB25 1140 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 BCAS4Q8TDM0 211 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 ZFPM2Q8WW38 1151 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 SYAP1Q96A49 352 aaPredicted RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 KTI12Q96EK9 354 aaPredicted RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 ADAD1Q96M93 576 aaKnown RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 ZNF347Q96SE7 839 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 PYM1Q9BRP8 204 aaKnown RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 KRTAP4-5Q9BYR2 181 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 PRSS22Q9GZN4 317 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 PLEKHA2Q9HB19 425 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 MOV10Q9HCE1 1003 aaKnown RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 ZBTB40Q9NUA8 1239 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.92□□□□□ -1.94
VPS41-206ENST00000418457 MTMR4Q9NYA4 1195 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 SLC25A13Q9UJS0 675 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 SLC8A2Q9UPR5 921 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 DERAQ9Y315 318 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 DDX49Q9Y6V7 483 aaKnown RBP2.92□□□□□ -1.94
VPS41-206ENST00000418457 SIGLEC1Q9BZZ2 1709 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 EVC2Q86UK5 1308 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 COL3A1P02461 1466 aaPredicted RBP2.91□□□□□ -1.94
VPS41-206ENST00000418457 PIK3C2BO00750 1634 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 MCIDASD6RGH6 385 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 EPB41L2O43491 1005 aaKnown RBP2.91□□□□□ -1.94
VPS41-206ENST00000418457 LETM1O95202 739 aaPredicted RBP2.91□□□□□ -1.94
VPS41-206ENST00000418457 BAG4O95429 457 aaKnown RBP2.91□□□□□ -1.94
VPS41-206ENST00000418457 NFATC1O95644 943 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 TPM3P06753 285 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 CHN1P15882 459 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 PNPLA4P41247 253 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 ABCG1P45844 678 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 CPA2P48052 419 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 OAZ1P54368 228 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 ADPRHP54922 357 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 ID2Q02363 134 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 CDK18Q07002 472 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 ALKBH1Q13686 389 aaKnown RBP2.91□□□□□ -1.94
VPS41-206ENST00000418457 EFR3AQ14156 821 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 TAF12Q16514 161 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 TMEM95Q3KNT9 176 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 MTX3Q5HYI7 312 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 ZNF484Q5JVG2 852 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 SLC2A7Q6PXP3 512 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 FAM57BQ71RH2 274 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 ANKS1BQ7Z6G8 1248 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 ZNF575Q86XF7 245 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 HERC6Q8IVU3 1022 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 PAQR4Q8N4S7 273 aaPredicted RBP2.91□□□□□ -1.94
VPS41-206ENST00000418457 OR52N4Q8NGI2 321 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 PRSS3P2Q8NHM4 247 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 CEP70Q8NHQ1 597 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 PPM1EQ8WY54 764 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 KCNJ9Q92806 393 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 ATP2A3Q93084 1043 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 COG8Q96MW5 612 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 SIGLEC11Q96RL6 698 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 SCNM1Q9BWG6 230 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 CLPBQ9H078 707 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 RMI1Q9H9A7 625 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 NOD2Q9HC29 1040 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 RASSF1Q9NS23 344 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 TNFSF13BQ9Y275 285 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms