RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 MAGEA1P43355 309 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 MRE11P49959 708 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 BYSLQ13895 437 aaKnown RBP10.76□□□□□ -0.69
RFC1-203ENST00000418436 DPYSL2Q16555 572 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 C9orf64Q5T6V5 341 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 TXNRD3NBQ6F5E7 133 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 C11orf74Q86VG3 221 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 RHOT2Q8IXI1 618 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 UMODL1-AS1Q8N2C9 162 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 PGBD3Q8N328 593 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 SH2D3CQ8N5H7 860 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 SLC35G2Q8TBE7 412 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 FAM71BQ8TC56 605 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 TEKT4Q8WW24 435 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 PTPRN2Q92932 1015 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 ARHGEF2Q92974 986 aaKnown RBP10.76□□□□□ -0.69
RFC1-203ENST00000418436 ERLEC1Q96DZ1 483 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 KCTD15Q96SI1 283 aaPredicted RBP10.76□□□□□ -0.69
RFC1-203ENST00000418436 DUSP15Q9H1R2 295 aaPredicted RBP10.76□□□□□ -0.69
RFC1-203ENST00000418436 SLC6A17Q9H1V8 727 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 RSPH9Q9H1X1 276 aaPredicted RBP10.76□□□□□ -0.69
RFC1-203ENST00000418436 MAGEH1Q9H213 219 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 MTG2Q9H4K7 406 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 NOL6Q9H6R4 1146 aaKnown RBP10.76□□□□□ -0.69
RFC1-203ENST00000418436 CATSPERBQ9H7T0 1116 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 OSGEPQ9NPF4 335 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 ITM2CQ9NQX7 267 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 DNAI1Q9UI46 699 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 VPS51Q9UID3 782 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 MBD1Q9UIS9 605 aaPredicted RBP10.76□□□□□ -0.69
RFC1-203ENST00000418436 SLC25A13Q9UJS0 675 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 EPN1Q9Y6I3 576 aaPredicted RBP10.76□□□□□ -0.69
RFC1-203ENST00000418436 ABCA7Q8IZY2 2146 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 SOWAHDA6NJG2 315 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 EEF2KO00418 725 aaKnown RBP10.75□□□□□ -0.69
RFC1-203ENST00000418436 DCLK1O15075 740 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 RAMP2O60895 175 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 ZNF217O75362 1048 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 NDUFA10O95299 355 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 MT-CO1P00395 513 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 IGLV3-19P01714 112 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 SRCP12931 536 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 GLDCP23378 1020 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 MAN1A1P33908 653 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 CYLC1P35663 651 aaPredicted RBP10.75□□□□□ -0.69
RFC1-203ENST00000418436 ACVRL1P37023 503 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 ARHGAP25P42331 645 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 NUMBP49757 651 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 HADHBP55084 474 aaKnown RBP10.75□□□□□ -0.69
RFC1-203ENST00000418436 YBEYP58557 167 aaPredicted RBP10.75□□□□□ -0.69
RFC1-203ENST00000418436 TPI1P60174 286 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 RPS14P62263 151 aaKnown RBP10.75□□□□□ -0.69
RFC1-203ENST00000418436 ARF5P84085 180 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 ZBTB16Q05516 673 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 SLC20A2Q08357 652 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 PLK5Q496M5 336 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 KCNT1Q5JUK3 1230 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 LAIR1Q6GTX8 287 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 LYPD8Q6UX82 237 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 PRR23BQ6ZRT6 265 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 RFX8Q6ZV50 586 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 CEP68Q76N32 757 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 KBTBD6Q86V97 674 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 CPNE8Q86YQ8 564 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 TMEM139Q8IV31 216 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 FRMD1Q8N878 549 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 RLN3Q8WXF3 142 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 RFFLQ8WZ73 363 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 TSC1Q92574 1164 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 PRCCQ92733 491 aaPredicted RBP10.75□□□□□ -0.69
RFC1-203ENST00000418436 SIPA1Q96FS4 1042 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 LOXL4Q96JB6 756 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 FAM129BQ96TA1 746 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 SPON2Q9BUD6 331 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 KLC2Q9H0B6 622 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 ATP13A1Q9HD20 1204 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 DONSONQ9NYP3 566 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 CWC15Q9P013 229 aaKnown RBP10.75□□□□□ -0.69
RFC1-203ENST00000418436 USP36Q9P275 1121 aaKnown RBP10.75□□□□□ -0.69
RFC1-203ENST00000418436 INVSQ9Y283 1065 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 PCDHA13Q9Y5I0 950 aa10.75□□□□□ -0.69
RFC1-203ENST00000418436 IGHV1OR15-9A0A0B4J2B8 117 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 SMAD6O43541 496 aaKnown RBP10.74□□□□□ -0.69
RFC1-203ENST00000418436 KDELR3O43731 214 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 ZNF821O75541 412 aaPredicted RBP10.74□□□□□ -0.69
RFC1-203ENST00000418436 CD160O95971 181 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 GOT1P17174 413 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 ERCC2P18074 760 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 BCKDHBP21953 392 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 ARSEP51690 589 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 TAS2R40P59535 323 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 DPYSQ14117 519 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 POLD3Q15054 466 aaPredicted RBP10.74□□□□□ -0.69
RFC1-203ENST00000418436 SPA17Q15506 151 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 DLG2Q15700 870 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 HADHQ16836 314 aaKnown RBP10.74□□□□□ -0.69
RFC1-203ENST00000418436 SMTNL2Q2TAL5 461 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 PPP6R3Q5H9R7 873 aaPredicted RBP10.74□□□□□ -0.69
RFC1-203ENST00000418436 SPDYCQ5MJ68 293 aa10.74□□□□□ -0.69
RFC1-203ENST00000418436 AFMIDQ63HM1 303 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms