RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 KIAA1324Q6UXG2 1013 aaKnown RBP22.84■■□□□ 1.25
PTCD3-203ENST00000409783 TP53INP2Q8IXH6 220 aa22.84■■□□□ 1.25
PTCD3-203ENST00000409783 STK40Q8N2I9 435 aa22.84■■□□□ 1.25
PTCD3-203ENST00000409783 ATP11CQ8NB49 1132 aa22.84■■□□□ 1.25
PTCD3-203ENST00000409783 CCDC112Q8NEF3 446 aa22.84■■□□□ 1.25
PTCD3-203ENST00000409783 RAPGEF5Q92565 580 aa22.84■■□□□ 1.25
PTCD3-203ENST00000409783 FAF2Q96CS3 445 aa22.84■■□□□ 1.25
PTCD3-203ENST00000409783 SIPA1Q96FS4 1042 aa22.84■■□□□ 1.25
PTCD3-203ENST00000409783 USP36Q9P275 1121 aaKnown RBP22.84■■□□□ 1.25
PTCD3-203ENST00000409783 MBD1Q9UIS9 605 aaPredicted RBP22.84■■□□□ 1.25
PTCD3-203ENST00000409783 ADGRG1Q9Y653 693 aa22.84■■□□□ 1.25
PTCD3-203ENST00000409783 GPR179Q6PRD1 2367 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 USP34Q70CQ2 3546 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 C3orf70A6NLC5 250 aaPredicted RBP22.83■■□□□ 1.25
PTCD3-203ENST00000409783 ZBTB24O43167 697 aaPredicted RBP22.83■■□□□ 1.25
PTCD3-203ENST00000409783 ARHGAP6O43182 974 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 BCKDHBP21953 392 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 KDELR1P24390 212 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 CCZ1BP86790 482 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 CCZ1P86791 482 aaPredicted RBP22.83■■□□□ 1.25
PTCD3-203ENST00000409783 SIM2Q14190 667 aaPredicted RBP22.83■■□□□ 1.25
PTCD3-203ENST00000409783 ACCSLQ4AC99 568 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 Q6ZVU0 165 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 KIAA1328Q86T90 577 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 FAM160A2Q8N612 972 aaPredicted RBP22.83■■□□□ 1.25
PTCD3-203ENST00000409783 NETO2Q8NC67 525 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 KCTD6Q8NC69 237 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 PRCCQ92733 491 aaPredicted RBP22.83■■□□□ 1.25
PTCD3-203ENST00000409783 ZNF670Q9BS34 389 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 ITM2CQ9NQX7 267 aa22.83■■□□□ 1.25
PTCD3-203ENST00000409783 THADAQ6YHU6 1953 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 IGHV1OR15-9A0A0B4J2B8 117 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 IGLV3-19P01714 112 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 PAPOLAP51003 745 aaKnown RBP22.82■■□□□ 1.24
PTCD3-203ENST00000409783 C22orf39Q6P5X5 142 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 KBTBD6Q86V97 674 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 CACUL1Q86Y37 369 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 RHOT1Q8IXI2 618 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 LZTR1Q8N653 840 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 PCDH19Q8TAB3 1148 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 NKD2Q969F2 451 aaPredicted RBP22.82■■□□□ 1.24
PTCD3-203ENST00000409783 ZC3H10Q96K80 434 aaKnown RBP22.82■■□□□ 1.24
PTCD3-203ENST00000409783 CALR3Q96L12 384 aaKnown RBP22.82■■□□□ 1.24
PTCD3-203ENST00000409783 CEP44Q9C0F1 390 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 PDFQ9HBH1 243 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 TRIM10Q9UDY6 481 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 HPCAL4Q9UM19 191 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 CEP192Q8TEP8 1941 aa22.82■■□□□ 1.24
PTCD3-203ENST00000409783 SPOPO43791 374 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 ZNF217O75362 1048 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 PLA2G5P39877 138 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 TPMTP51580 245 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 ZBTB16Q05516 673 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 ELAVL3Q14576 367 aaKnown RBP22.81■■□□□ 1.24
PTCD3-203ENST00000409783 PLK5Q496M5 336 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 ANKRD20A8PQ5CZ79 823 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 ZNF776Q68DI1 518 aaPredicted RBP22.81■■□□□ 1.24
PTCD3-203ENST00000409783 TMCO3Q6UWJ1 677 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 LEKR1Q6ZMV7 388 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 OR2A12Q8NGT7 310 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 CALN1Q9BXU9 219 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 DUSP15Q9H1R2 295 aaPredicted RBP22.81■■□□□ 1.24
PTCD3-203ENST00000409783 CYP8B1Q9UNU6 501 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 SMG5Q9UPR3 1016 aaKnown RBP22.81■■□□□ 1.24
PTCD3-203ENST00000409783 FCF1Q9Y324 198 aaKnown RBP22.81■■□□□ 1.24
PTCD3-203ENST00000409783 SDK1Q7Z5N4 2213 aa22.81■■□□□ 1.24
PTCD3-203ENST00000409783 OTOGLQ3ZCN5 2332 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 PRR23AA6NEV1 266 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 ZSCAN5CA6NGD5 496 aaPredicted RBP22.8■■□□□ 1.24
PTCD3-203ENST00000409783 ARHGAP42A6NI28 874 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 J3KR12 359 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 MCF2LO15068 1137 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 PRAMEF11O60813 436 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 LMNAP02545 664 aaKnown RBP22.8■■□□□ 1.24
PTCD3-203ENST00000409783 GEMIN4P57678 1058 aaKnown RBP22.8■■□□□ 1.24
PTCD3-203ENST00000409783 BYSLQ13895 437 aaKnown RBP22.8■■□□□ 1.24
PTCD3-203ENST00000409783 NUMA1Q14980 2115 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 ARHGAP36Q6ZRI8 547 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 CEP68Q76N32 757 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 ASCL5Q7RTU5 278 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 VSIG1Q86XK7 387 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 MAP7D3Q8IWC1 876 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 PQLC3Q8N755 202 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 LRRC57Q8N9N7 239 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 ISG20Q96AZ6 181 aaKnown RBP22.8■■□□□ 1.24
PTCD3-203ENST00000409783 TNKS2Q9H2K2 1166 aa22.8■■□□□ 1.24
PTCD3-203ENST00000409783 ZNF487B1APH4 448 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 ALOX15BO15296 676 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 PSTPIP1O43586 416 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 MARCKSL1P49006 195 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 KIF5AQ12840 1032 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 PAFAH1B3Q15102 231 aaKnown RBP22.79■■□□□ 1.24
PTCD3-203ENST00000409783 CST6Q15828 149 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 INO80DQ53TQ3 878 aaPredicted RBP22.79■■□□□ 1.24
PTCD3-203ENST00000409783 NCBP2-AS2Q69YL0 99 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 PRR23BQ6ZRT6 265 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 DAAM2Q86T65 1068 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 ZNF354CQ86Y25 554 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 MMAAQ8IVH4 418 aaKnown RBP22.79■■□□□ 1.24
PTCD3-203ENST00000409783 PCDH20Q8N6Y1 951 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms