RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 IL12RB2Q99665 862 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 APOL2Q9BQE5 337 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 WDR83Q9BRX9 315 aaKnown RBP12.7□□□□□ -0.38
CHMP3-204ENST00000409727 VPS37BQ9H9H4 285 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 ATP13A1Q9HD20 1204 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 NFS1Q9Y697 457 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 MYO9BQ13459 2157 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 TTC24A2A3L6 582 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-204ENST00000409727 CBX4O00257 560 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 ALOX15BO15296 676 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 GLP2RO95838 553 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 SYF2O95926 243 aaKnown RBP12.7□□□□□ -0.38
CHMP3-204ENST00000409727 MT-CYBP00156 380 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-204ENST00000409727 ELK3P41970 407 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 RENBPP51606 427 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 OXCT1P55809 520 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 KCNC3Q14003 757 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 SPDYCQ5MJ68 293 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 CXorf57Q6NSI4 855 aaKnown RBP12.7□□□□□ -0.38
CHMP3-204ENST00000409727 EP400NLQ6ZTU2 488 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 ZNF534Q76KX8 674 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 KDELC2Q7Z4H8 507 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 IGDCC3Q8IVU1 814 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 MFN1Q8IWA4 741 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 WFDC5Q8TCV5 224 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 MLPHQ9BV36 600 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-204ENST00000409727 MAGEH1Q9H213 219 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 ZNF510Q9Y2H8 683 aa12.7□□□□□ -0.38
CHMP3-204ENST00000409727 TLDC2A0PJX2 215 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 LUC7L3O95232 432 aaKnown RBP12.69□□□□□ -0.38
CHMP3-204ENST00000409727 MZF1P28698 734 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-204ENST00000409727 OAS2P29728 719 aaKnown RBP12.69□□□□□ -0.38
CHMP3-204ENST00000409727 SSTR1P30872 391 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 MMP13P45452 471 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 SLCO1A2P46721 670 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 SESN2P58004 480 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-204ENST00000409727 CRADDP78560 199 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 IL10RBQ08334 325 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 HYAL1Q12794 435 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 PRPSAP1Q14558 356 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 GET4Q7L5D6 327 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-204ENST00000409727 SETD3Q86TU7 594 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-204ENST00000409727 RELL1Q8IUW5 271 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 FAM217AQ8IXS0 508 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 PALM2Q8IXS6 379 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 KRT222Q8N1A0 295 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 AGGF1Q8N302 714 aaeCLIP12.69□□□□□ -0.388e-6■□□□□ 11.2
CHMP3-204ENST00000409727 MPP5Q8N3R9 675 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 MCUQ8NE86 351 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 MAML1Q92585 1016 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 CFAP36Q96G28 342 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 OXNAD1Q96HP4 312 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-204ENST00000409727 CDCA3Q99618 268 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-204ENST00000409727 ZNF576Q9H609 170 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 NSUN3Q9H649 340 aaKnown RBP12.69□□□□□ -0.38
CHMP3-204ENST00000409727 GLOD4Q9HC38 313 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 FAM53CQ9NYF3 392 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 TBC1D30Q9Y2I9 924 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 MAD1L1Q9Y6D9 718 aa12.69□□□□□ -0.38
CHMP3-204ENST00000409727 HELZP42694 1942 aaKnown RBP12.68□□□□□ -0.38
CHMP3-204ENST00000409727 E2F8A0AVK6 867 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 ILVBLA1L0T0 632 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 E7ESA3 106 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 OPA1O60313 960 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 PRAMEF11O60813 436 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 GJB3O75712 270 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 AP2A1O95782 977 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 NUDT17P0C025 328 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 HOXD9P28356 352 aaPredicted RBP12.68□□□□□ -0.38
CHMP3-204ENST00000409727 CSKP41240 450 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 SARNPP82979 210 aaKnown RBP12.68□□□□□ -0.38
CHMP3-204ENST00000409727 HNRNPDQ14103 355 aaKnown RBP12.68□□□□□ -0.38
CHMP3-204ENST00000409727 LBRQ14739 615 aaKnown RBP12.68□□□□□ -0.38
CHMP3-204ENST00000409727 PCSK7Q16549 785 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 KRT71Q3SY84 523 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 KCTD16Q68DU8 428 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 LRIG3Q6UXM1 1119 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 LINGO4Q6UY18 593 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 IPMKQ8NFU5 416 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 OR52K1Q8NGK4 314 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 EPS8L3Q8TE67 593 aaKnown RBP12.68□□□□□ -0.38
CHMP3-204ENST00000409727 ARL8AQ96BM9 186 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 TRIM56Q9BRZ2 755 aaKnown RBP12.68□□□□□ -0.38
CHMP3-204ENST00000409727 LINC00597Q9H2U6 94 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 EIF2B3Q9NR50 452 aaKnown RBP12.68□□□□□ -0.38
CHMP3-204ENST00000409727 OGFRQ9NZT2 677 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 BCCIPQ9P287 314 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHMP3-204ENST00000409727 CLEC4EQ9ULY5 219 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 WNT6Q9Y6F9 365 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 GOLGA6L10A6NI86 522 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 GFRA2O00451 464 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 EIF3HO15372 352 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHMP3-204ENST00000409727 SNAP91O60641 907 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 PMPCBO75439 489 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 PIAS1O75925 651 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 CPP00450 1065 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 CYBBP04839 570 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 POU2F2P09086 479 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 FSHRP23945 695 aa12.68□□□□□ -0.38
CHMP3-204ENST00000409727 DSC2Q02487 901 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms