RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 EIF2B3Q9NR50 452 aaKnown RBP13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 CHMP2BQ9UQN3 213 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 NME7Q9Y5B8 376 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 USH1CQ9Y6N9 552 aa13.21□□□□□ -0.29
SMARCB1-203ENST00000407082 MIA3Q5JRA6 1907 aa13.21□□□□□ -0.3
SMARCB1-203ENST00000407082 DOCK8Q8NF50 2099 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 WDR27A2RRH5 827 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 CAPN9O14815 690 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 TYROBPO43914 113 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 HNRNPCL1O60812 293 aaKnown RBP13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 OPHN1O60890 802 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 TMEM63AO94886 807 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 ABLIM3O94929 683 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 SNRPAP09012 282 aaKnown RBP13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 KRT4P19013 534 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 HCAR3P49019 387 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 RASSF2P50749 326 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 NTHL1P78549 312 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 PRKCQQ04759 706 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 DEUP1Q05D60 604 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 DNAJC3Q13217 504 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 MAPRE1Q15691 268 aaKnown RBP13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 TPGS2Q68CL5 300 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 LILRA6Q6PI73 481 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 PRR23BQ6ZRT6 265 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 CAPN12Q6ZSI9 719 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 CCDC91Q7Z6B0 441 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 GRASPQ7Z6J2 395 aaPredicted RBP13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 PIGZQ86VD9 579 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 LRRC6Q86X45 466 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 DEFB106AQ8N104 65 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 CCDC63Q8NA47 563 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 DCAKDQ8WVC6 231 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 IRGQQ8WZA9 623 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 NTAN1Q96AB6 310 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 PGLYRP2Q96PD5 576 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 CSPG4P5Q96PW8 444 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 SLC2A13Q96QE2 648 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 RHOBTB2Q9BYZ6 727 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 LTB4R2Q9NPC1 389 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 TXLNGQ9NUQ3 528 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 ZDHHC7Q9NXF8 308 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 ZC3H7BQ9UGR2 993 aaKnown RBP13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 COL4A3Q01955 1670 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 TSC2P49815 1807 aa13.2□□□□□ -0.3
SMARCB1-203ENST00000407082 MYBPHLA2RUH7 354 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 PSMD3O43242 534 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 SPAG7O75391 227 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 C1RP00736 705 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 CREB1P16220 341 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 TGM1P22735 817 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 PRKCHP24723 683 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 ELF1P32519 619 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 PFKPQ01813 784 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 SLC18A2Q05940 514 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 ADCY1Q08828 1119 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 SMARCB1Q12824 385 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 SEMA5AQ13591 1074 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 MPP2Q14168 576 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 NFE2Q16621 373 aaPredicted RBP13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 DBN1Q16643 649 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 MSS51Q4VC12 460 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 MDH1BQ5I0G3 518 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 HP1BP3Q5SSJ5 553 aaPredicted RBP13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 FAM171BQ6P995 826 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 ZNF449Q6P9G9 518 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 LVRNQ6Q4G3 990 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 TPRG1Q6ZUI0 275 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 SCML4Q8N228 414 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 HTR3CQ8WXA8 447 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 CDKL2Q92772 493 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 NT5C3BQ969T7 300 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 PGAP3Q96FM1 320 aaPredicted RBP13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 PIWIL1Q96J94 861 aaKnown RBP13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 KCTD15Q96SI1 283 aaPredicted RBP13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 NPY6RQ99463 290 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 PKMYT1Q99640 499 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 KXD1Q9BQD3 176 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 LPIN3Q9BQK8 851 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 B3GNT5Q9BYG0 378 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 ETNK1Q9HBU6 452 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 CRTAC1Q9NQ79 661 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 KLC4Q9NSK0 619 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 TMLHEQ9NVH6 421 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 GPATCH2LQ9NWQ4 482 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 AFF4Q9UHB7 1163 aaKnown RBP13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 CDH7Q9ULB5 785 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 PHTF1Q9UMS5 762 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 SLC12A4Q9UP95 1085 aa13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 ZFP37Q9Y6Q3 630 aaPredicted RBP13.19□□□□□ -0.3
SMARCB1-203ENST00000407082 A0A0A0MRY4 1105 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 TCRBV9S1A1TA0A576 114 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 MTMR11A4FU01 709 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 SLC30A4O14863 429 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 EDF1O60869 148 aaKnown RBP13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 LILRB5O75023 590 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 APOEP02649 317 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 APRTP07741 180 aa13.18□□□□□ -0.3
SMARCB1-203ENST00000407082 NEFHP12036 1026 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms