RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 FSCBQ5H9T9 825 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 SPANXN3Q5MJ09 141 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 PDPK2PQ6A1A2 396 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 CHPFQ8IZ52 775 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 GBP7Q8N8V2 638 aaPredicted RBP9.25□□□□□ -0.93
LIG4-202ENST00000405925 GIMAP7Q8NHV1 300 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 PIK3R5Q8WYR1 880 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 GRAMD1AQ96CP6 724 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 RMDN2Q96LZ7 410 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 ZBTB18Q99592 522 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 SHCBP1LQ9BZQ2 653 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 WWP1Q9H0M0 922 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 RASSF4Q9H2L5 321 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 BRD9Q9H8M2 597 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 TBC1D14Q9P2M4 693 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 FZD10Q9ULW2 581 aa9.25□□□□□ -0.93
LIG4-202ENST00000405925 BEST1O76090 585 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 SUPT7LO94864 414 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 FGF19O95750 216 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 PTPN7P35236 360 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 GNA12Q03113 381 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 FAAP100Q0VG06 881 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 DPYSL2Q16555 572 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 MPPE1Q53F39 396 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 CLLU1OSQ5K130 101 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 RTP2Q5QGT7 225 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 UGT3A1Q6NUS8 523 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 HIBCHQ6NVY1 386 aaPredicted RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 ARID3BQ8IVW6 561 aaPredicted RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 CMASQ8NFW8 434 aaPredicted RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 C8orf48Q96LL4 319 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 TACO1Q9BSH4 297 aaKnown RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 ATP13A3Q9H7F0 1226 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 TMPRSS4Q9NRS4 437 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 DTLQ9NZJ0 730 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 KIAA1522Q9P206 1035 aaPredicted RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 DEC1Q9P2X7 70 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 CTNNAL1Q9UBT7 734 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 RUVBL2Q9Y230 463 aaKnown RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 ASB3Q9Y575 518 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 ZFP37Q9Y6Q3 630 aaPredicted RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 ADH1CP00326 375 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 ABL2P42684 1182 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 IRAK1P51617 712 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 CDK18Q07002 472 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 MAP7Q14244 749 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 PREPLQ4J6C6 727 aaPredicted RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 PCID2Q5JVF3 399 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 OTOP3Q7RTS5 596 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 MRPL10Q7Z7H8 261 aaKnown RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 RAB42Q8N4Z0 105 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 KBTBD7Q8WVZ9 684 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 SNX19Q92543 992 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 ART4Q93070 314 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 CACYBPQ9HB71 228 aaKnown RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 TLR9Q9NR96 1032 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 PKD2L2Q9NZM6 624 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 FBXL21Q9UKT6 434 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 TRIM33Q9UPN9 1127 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 ZNF510Q9Y2H8 683 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 CRYL1Q9Y2S2 319 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 NCF1BA6NI72 391 aaPredicted RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 NCF1CA8MVU1 366 aaPredicted RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 FAM155AB1AL88 458 aaPredicted RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 ESRRBO95718 433 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 IL1BP01584 269 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 NCF1P14598 390 aaPredicted RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 CNTFP26441 200 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 KCNQ1P51787 676 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 SESN3P58005 492 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 GALNT3Q14435 633 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 ACOX1Q15067 660 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 E2F5Q15329 346 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 PARP15Q460N3 678 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 FAM182AQ5T1J6 154 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 MFSD5Q6N075 450 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 FAM126BQ8IXS8 530 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 RTL3Q8N8U3 475 aaKnown RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 N4BP2L2Q92802 583 aaPredicted RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 GAS2L1Q99501 681 aaPredicted RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 KATNBL1Q9H079 304 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 EPN3Q9H201 632 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 EML4Q9HC35 981 aaKnown RBP9.24□□□□□ -0.93
LIG4-202ENST00000405925 CHKBQ9Y259 395 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 INSL5Q9Y5Q6 135 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 RAD54BQ9Y620 910 aa9.24□□□□□ -0.93
LIG4-202ENST00000405925 F8W810 466 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 SHBGP04278 402 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 HAPLN1P10915 354 aaPredicted RBP9.23□□□□□ -0.93
LIG4-202ENST00000405925 CTPS1P17812 591 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 CDH5P33151 784 aaPredicted RBP9.23□□□□□ -0.93
LIG4-202ENST00000405925 MAPK8P45983 427 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 SFSWAPQ12872 951 aaKnown RBP9.23□□□□□ -0.93
LIG4-202ENST00000405925 OVGP1Q12889 678 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 USP45Q70EL2 814 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 WDTC1Q8N5D0 677 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 NTAN1Q96AB6 310 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 CERS2Q96G23 380 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 OSGEPL1Q9H4B0 414 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms