RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 F5P12259 2224 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 DOCK4Q8N1I0 1966 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 E2F8A0AVK6 867 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 SNAP91O60641 907 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 PMPCBO75439 489 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 LUC7L3O95232 432 aaKnown RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 LATS1O95835 1130 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 HLA-DQB2P05538 268 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 PFKLP17858 780 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 MMP13P45452 471 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 SARNPP82979 210 aaKnown RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 DLX2Q07687 328 aaPredicted RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 SEMA5AQ13591 1074 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 KCNC3Q14003 757 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 PRPSAP1Q14558 356 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 ZNF235Q14590 738 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 GRIN2CQ14957 1233 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 PCSK7Q16549 785 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 C5orf22Q49AR2 442 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 MPPE1Q53F39 396 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 HSP90B2PQ58FF3 399 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 FAM78AQ5JUQ0 283 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 CEP85LQ5SZL2 805 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 TTC39BQ5VTQ0 682 aaPredicted RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 TRIM68Q6AZZ1 485 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 CXorf57Q6NSI4 855 aaKnown RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 CES5AQ6NT32 575 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 SYCE2Q6PIF2 218 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 CHST9Q7L1S5 443 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 GPR149Q86SP6 731 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 SETD3Q86TU7 594 aaPredicted RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 RNF135Q8IUD6 432 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 NPAS3Q8IXF0 933 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 MREGQ8N565 214 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 EFHBQ8N7U6 833 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 NAT16Q8N8M0 369 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 DNAAF3Q8N9W5 541 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 FBXO36Q8NEA4 188 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 IPMKQ8NFU5 416 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 PYROXD1Q8WU10 500 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 MRRFQ96E11 262 aaKnown RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 ZFYVE19Q96K21 471 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 EXOC2Q96KP1 924 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 BBS2Q9BXC9 721 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 MAGEH1Q9H213 219 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 GBA3Q9H227 469 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 ACBD3Q9H3P7 528 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 VPS37BQ9H9H4 285 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 CHMP2BQ9UQN3 213 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 TLDC2A0PJX2 215 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 ILVBLA1L0T0 632 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 RIPK2O43353 540 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 ATP8B1O43520 1251 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 PRAMEF11O60813 436 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 GJB3O75712 270 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 PIAS1O75925 651 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 SHBGP04278 402 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 HOXD9P28356 352 aaPredicted RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 CSKP41240 450 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 SLCO1A2P46721 670 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 CRADDP78560 199 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 IFI35P80217 286 aaPredicted RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 ZNF33AQ06730 810 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 IL10RBQ08334 325 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 GPS2Q13227 327 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 HNRNPDQ14103 355 aaKnown RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 LBRQ14739 615 aaKnown RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 ATAT1Q5SQI0 421 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 LY6G5CQ5SRR4 150 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 ANKRD54Q6NXT1 300 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 PPP1R21Q6ZMI0 780 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 CAND1Q86VP6 1230 aaKnown RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 PALM2Q8IXS6 379 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 CELF5Q8N6W0 485 aaKnown RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 CFAP36Q96G28 342 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 OXNAD1Q96HP4 312 aaPredicted RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 LRRC3BQ96PB8 259 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 FEM1AQ9BSK4 669 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 TXLNGYQ9BZA5 131 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 TTYH1Q9H313 450 aaPredicted RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 VIPAS39Q9H9C1 493 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 GLOD4Q9HC38 313 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 NINJ2Q9NZG7 142 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 IGSF9Q9P2J2 1179 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 COLQQ9Y215 455 aaPredicted RBP3.78□□□□□ -1.8
RTN4-208ENST00000404909 TBC1D30Q9Y2I9 924 aa3.78□□□□□ -1.8
RTN4-208ENST00000404909 GOLGA6L10A6NI86 522 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 SMAPO00193 183 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ZNF189O75820 626 aaPredicted RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 TTC4O95801 387 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 PEX11BO96011 259 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 TPH1P17752 444 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 GBP2P32456 591 aaPredicted RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 CD70P32970 193 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ELK3P41970 407 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 CD86P42081 329 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 DSC2Q02487 901 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 SMAD1Q15797 465 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 ZNF77Q15935 545 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 TMCO4Q5TGY1 634 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms