RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 UBL4BQ8N7F7 174 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 KCNV2Q8TDN2 545 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 LRRN4Q8WUT4 740 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 UCMAQ8WVF2 138 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ACDQ96AP0 544 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 VOPP1Q96AW1 172 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ZNF419Q96HQ0 510 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 OLFM3Q96PB7 478 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 WDR24Q96S15 920 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 C2orf49Q9BVC5 232 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 HEMGNQ9BXL5 484 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 OSBPL8Q9BZF1 889 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SAE1Q9UBE0 346 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 HS3ST2Q9Y278 367 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 RAD54BQ9Y620 910 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CACNA1IQ9P0X4 2223 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SHROOM3Q8TF72 1996 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 GOLGA6L9A6NEM1 432 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 DFFAO00273 331 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 APOL1O14791 398 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ATP9BO43861 1147 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MAFKO60675 156 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SRPRAP08240 638 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TDGF1P13385 188 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 NTSR1P30989 418 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ETFBP38117 255 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MAGEA9P43362 315 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SERPINH1P50454 418 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SATB1Q01826 763 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SULT2A1Q06520 285 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 KLF1Q13351 362 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 RPS6KA1Q15418 735 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 FNDC3BQ53EP0 1204 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MAMSTRQ6ZN01 415 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SYT13Q7L8C5 426 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CCDC50Q8IVM0 306 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CHPFQ8IZ52 775 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 KDM1BQ8NB78 822 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ERLEC1Q96DZ1 483 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 LRFN3Q9BTN0 628 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PRMT8Q9NR22 394 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 IPO11Q9UI26 975 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 EFR3BQ9Y2G0 817 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ZKSCAN5Q9Y2L8 839 aa12.67□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CXorf51AA0A1B0GTR3 108 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ARHGAP42A6NI28 874 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 K7ESF4 209 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 KIF5CO60282 957 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 HOXB2P14652 356 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SERPINB6P35237 376 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 GARSP41250 739 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TFDP2Q14188 446 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CRY1Q16526 586 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 HNRNPA1L2Q32P51 320 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 HSF5Q4G112 596 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TMEM31Q5JXX7 168 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 FAM182AQ5T1J6 154 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 C22orf39Q6P5X5 142 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SERPINA13PQ6UXR4 307 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 DTWD2Q8NBA8 298 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 UBE2Q2Q8WVN8 375 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PTPRN2Q92932 1015 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 HAUS1Q96CS2 278 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 IER2Q9BTL4 223 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CARD9Q9H257 536 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PRDM16Q9HAZ2 1276 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 DONSONQ9NYP3 566 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 LHX3Q9UBR4 397 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 R3HDM2Q9Y2K5 976 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 FCF1Q9Y324 198 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 JRKLQ9Y4A0 524 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 HEY1Q9Y5J3 304 aa12.66□□□□□ -0.38
HLA-DQB1-203ENST00000399082 RNF103O00237 685 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 KCNK3O14649 394 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 NPC1O15118 1278 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MUSKO15146 869 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MAP3K13O43283 966 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PAPSS2O95340 614 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 EPHX1P07099 455 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ZFXP17010 805 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TGM2P21980 687 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CXCR5P32302 372 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 GNG11P61952 73 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 IL10RBQ08334 325 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CAMK2GQ13555 558 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 NOMO1Q15155 1222 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CYTH1Q15438 398 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SIX1Q15475 284 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 DLG2Q15700 870 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ODF2Q5BJF6 829 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 EOGTQ5NDL2 527 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 C9orf64Q5T6V5 341 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 RETSATQ6NUM9 610 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 Q6ZVU0 165 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 B4GALNT4Q76KP1 1039 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TRMT11Q7Z4G4 463 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ATPAF2Q8N5M1 289 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CCDC26Q8TAB7 109 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 HDAC11Q96DB2 347 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms