RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 TLK2Q86UE8 772 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 IFNEQ86WN2 208 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 KBTBD2Q8IY47 623 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 B3GALNT2Q8NCR0 500 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PHF21BQ96EK2 531 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 SARS2Q9NP81 518 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NRP1O14786 923 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TNPO2O14787 897 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TPST1O60507 370 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 FBXO21O94952 628 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ATP6V1B1P15313 513 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 IGFBP6P24592 240 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NAGLUP54802 743 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CSE1LP55060 971 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 KYAT3Q6YP21 454 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ENDOVQ8N8Q3 282 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 URGCPQ8TCY9 931 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ABTB1Q969K4 478 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CMTM5Q96DZ9 223 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 MPP4Q96JB8 637 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TMEM209Q96SK2 561 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TINF2Q9BSI4 451 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TCF7L2Q9NQB0 619 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PGM3O95394 542 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 MMP3P08254 477 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 IRF1P10914 325 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 GRIA4P48058 902 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 MRPS22P82650 360 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PCID2Q5JVF3 399 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ARHGAP17Q68EM7 881 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ESRP1Q6NXG1 681 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TAPT1Q6NXT6 567 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TFAP2DQ7Z6R9 452 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 AMIGO2Q86SJ2 522 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TOP6BLQ8N6T0 577 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NPAS2Q99743 824 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 DUSP16Q9BY84 665 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 RPL26L1Q9UNX3 145 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 COL16A1Q07092 1604 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NCF1BA6NI72 391 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NCF1CA8MVU1 366 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 MSI1O43347 362 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ENDOD1O94919 500 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NCF1P14598 390 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 HNRNPLP14866 589 aaKnown RBP eCLIP5.01□□□□□ -1.612e-7■■□□□ 14.5
SMAD4-202ENST00000398417 DAOAP59103 153 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 SFT2D3Q587I9 215 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TAS2R42Q7RTR8 314 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NT5DC4Q86YG4 428 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CRYBG2Q8N1P7 616 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PHTF2Q8N3S3 785 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ACVR1CQ8NER5 493 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 BHLHE22Q8NFJ8 381 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 KHSRPQ92945 711 aaKnown RBP eCLIP5.01□□□□□ -1.611e-6■■■□□ 18.6
SMAD4-202ENST00000398417 GCNAQ96QF7 691 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 RBBP8Q99708 897 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 KLHL4Q9C0H6 718 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 SLC39A8Q9C0K1 460 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NACA2Q9H009 215 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CAAP1Q9H8G2 361 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NT5MQ9NPB1 228 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 STX18Q9P2W9 335 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ADAM28Q9UKQ2 775 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PPM1HQ9ULR3 514 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TSC22D4Q9Y3Q8 395 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 MYH2Q9UKX2 1941 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NRCAMQ92823 1304 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TOGARAM1Q9Y4F4 1720 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TREHO43280 583 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 RHOBTB1O94844 696 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 DARSP14868 501 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CPB1P15086 417 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 SLC18A1P54219 525 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PLIN5Q00G26 463 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 DPYSL2Q16555 572 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CCL14Q16627 93 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TRMT5Q32P41 509 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 MBLAC2Q68D91 279 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 STRADAQ7RTN6 431 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 DIS3LQ8TF46 1054 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PPWD1Q96BP3 646 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 LENG8Q96PV6 779 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PARK7Q99497 189 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 DHRS4Q9BTZ2 278 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 GPAMQ9HCL2 828 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 COPG2Q9UBF2 871 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 OR12D3Q9UGF7 316 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 FETUBQ9UGM5 382 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 BTRCQ9Y297 605 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CDY2AQ9Y6F7 541 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CDY1Q9Y6F8 540 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 V9GYQ6 96 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 MYH15Q9Y2K3 1946 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NEMP2A6NFY4 417 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 YJEFN3A6XGL0 299 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ZNF839A8K0R7 811 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 STX16-NPEPL1H3BU86 382 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 DLDP09622 509 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PAMP19021 973 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 WARSP23381 471 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms