RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 ACTL7AQ9Y615 435 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 J3KR12 359 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 SMAD6O43541 496 aaKnown RBP10.82□□□□□ -0.68
NUP98-205ENST00000397007 GSRP00390 522 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 MT-CO1P00395 513 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 SULT2A1Q06520 285 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 RNF219Q5W0B1 726 aaPredicted RBP10.82□□□□□ -0.68
NUP98-205ENST00000397007 LRRC31Q6UY01 552 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 PEX26Q7Z412 305 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 CNTD1Q8N815 330 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 ARRDC2Q8TBH0 407 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 OSBPL8Q9BZF1 889 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 SIK2Q9H0K1 926 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 CCDC163A0A0D9SF12 145 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 CYBBP04839 570 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 OR1E1P30953 314 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 CD68P34810 354 aaPredicted RBP10.82□□□□□ -0.68
NUP98-205ENST00000397007 HNRNPA1L2Q32P51 320 aaKnown RBP10.82□□□□□ -0.68
NUP98-205ENST00000397007 SCYL2Q6P3W7 929 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 OR2A12Q8NGT7 310 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 COG1Q8WTW3 980 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 PSKH2Q96QS6 385 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 TRIB3Q96RU7 358 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 OSBPL9Q96SU4 736 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 MYO18AQ92614 2054 aaKnown RBP10.82□□□□□ -0.68
NUP98-205ENST00000397007 LAMA1P25391 3075 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 TARSL2A2RTX5 802 aaKnown RBP10.82□□□□□ -0.68
NUP98-205ENST00000397007 HACD1B0YJ81 288 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 SGK1O00141 431 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 NCAM2O15394 837 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 SNAP91O60641 907 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 ZRANB2O95218 330 aaKnown RBP eCLIP10.82□□□□□ -0.682e-8■■□□□ 12.4
NUP98-205ENST00000397007 IPO7O95373 1038 aaKnown RBP10.82□□□□□ -0.68
NUP98-205ENST00000397007 KRT1P04264 644 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 KRT10P13645 584 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 MAGEA6P43360 314 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 ETF1P62495 437 aaKnown RBP10.82□□□□□ -0.68
NUP98-205ENST00000397007 TMCO4Q5TGY1 634 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 KIAA1211LQ6NV74 962 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 NPNTQ6UXI9 565 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 SPEM1Q8N4L4 309 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 CPEB1Q9BZB8 566 aaKnown RBP10.82□□□□□ -0.68
NUP98-205ENST00000397007 WASF2Q9Y6W5 498 aa10.82□□□□□ -0.68
NUP98-205ENST00000397007 MATN3O15232 486 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 SRGAP2O75044 1071 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 ZFXP17010 805 aaPredicted RBP10.81□□□□□ -0.68
NUP98-205ENST00000397007 ECT2LQ008S8 904 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 CDKN3Q16667 212 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 RALGPS1Q5JS13 557 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 EMC10Q5UCC4 262 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 KCTD11Q693B1 232 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 TFAP2DQ7Z6R9 452 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 NAT16Q8N8M0 369 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 PRELID2Q8N945 189 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 KCTD6Q8NC69 237 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 PRSS16Q9NQE7 514 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 PPM1HQ9ULR3 514 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.81□□□□□ -0.68
NUP98-205ENST00000397007 PDE2AO00408 941 aaPredicted RBP10.81□□□□□ -0.68
NUP98-205ENST00000397007 HTRA2O43464 458 aaPredicted RBP10.81□□□□□ -0.68
NUP98-205ENST00000397007 APODP05090 189 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 ETFBP38117 255 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 RGRP47804 291 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 ZBTB17Q13105 803 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 ZNF177Q13360 481 aaPredicted RBP10.81□□□□□ -0.68
NUP98-205ENST00000397007 ANO4Q32M45 955 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 CARNMT1Q8N4J0 409 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 TTC8Q8TAM2 541 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 PBKQ96KB5 322 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 TMEM131Q92545 1883 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 ZSCAN5CA6NGD5 496 aaPredicted RBP10.81□□□□□ -0.68
NUP98-205ENST00000397007 LIASO43766 372 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 CREB3O43889 395 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 RAMP2O60895 175 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 LRRC32Q14392 662 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 POLD3Q15054 466 aaPredicted RBP10.81□□□□□ -0.68
NUP98-205ENST00000397007 PEAR1Q5VY43 1037 aaPredicted RBP10.81□□□□□ -0.68
NUP98-205ENST00000397007 TMCO3Q6UWJ1 677 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 ORAI3Q9BRQ5 295 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 FBRSQ9HAH7 460 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 DNAI1Q9UI46 699 aa10.81□□□□□ -0.68
NUP98-205ENST00000397007 DRG1Q9Y295 367 aaKnown RBP10.81□□□□□ -0.68
NUP98-205ENST00000397007 SPOPO43791 374 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 RHOCP08134 193 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 STK19P49842 368 aaPredicted RBP10.8□□□□□ -0.68
NUP98-205ENST00000397007 KDSRQ06136 332 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 GRSF1Q12849 480 aaKnown RBP eCLIP10.8□□□□□ -0.68
NUP98-205ENST00000397007 MTAPQ13126 283 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 HNRNPDQ14103 355 aaKnown RBP10.8□□□□□ -0.68
NUP98-205ENST00000397007 MAP7D3Q8IWC1 876 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 SORCS1Q8WY21 1168 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 RBM12Q9NTZ6 932 aaKnown RBP10.8□□□□□ -0.68
NUP98-205ENST00000397007 TMEM110-MUSTN1A8MSY1 372 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 K7ERQ8 282 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 APOL1O14791 398 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 RNF40O75150 1001 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 ITGAVP06756 1048 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 CD72P21854 359 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 TTC27Q6P3X3 843 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 FBXL6Q8N531 539 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms