RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 SCML4Q8N228 414 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 FBXL13Q8NEE6 735 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 IRGQQ8WZA9 623 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 FAM149B1Q96BN6 582 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 EEF2KMTQ96G04 330 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 SEMA3CQ99985 751 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 FOXP3Q9BZS1 431 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 FOXD4L1Q9NU39 408 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 PPP4R2Q9NY27 417 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 FAM13BQ9NYF5 915 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 GULP1Q9UBP9 304 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 PISDQ9UG56 409 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 SERTAD1Q9UHV2 236 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 KLF15Q9UIH9 416 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 PADI4Q9UM07 663 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 TLR6Q9Y2C9 796 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 CSNK1G3Q9Y6M4 447 aa9.9□□□□□ -0.82
IFT88-203ENST00000389373 DOCK9Q9BZ29 2069 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 BLACEA4D250 179 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 MAPK13O15264 365 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 ALOX15BO15296 676 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 ATP9BO43861 1147 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 CTSLP07711 333 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 ANXA6P08133 673 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 JMJD7P0C870 316 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 LIPCP11150 499 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 CHRNA3P32297 505 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 PSMC2P35998 433 aaKnown RBP9.89□□□□□ -0.83
IFT88-203ENST00000389373 MXI1P50539 228 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 PDX1P52945 283 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 LRMPQ12912 555 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 FOXD4L6Q3SYB3 417 aaPredicted RBP9.89□□□□□ -0.83
IFT88-203ENST00000389373 FOXD4L3Q6VB84 417 aaPredicted RBP9.89□□□□□ -0.83
IFT88-203ENST00000389373 TAC4Q86UU9 113 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 PARGQ86W56 976 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 ZFAND4Q86XD8 727 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 SLC35F3Q8IY50 421 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 RBFAQ8N0V3 343 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 ATP6V0D2Q8N8Y2 350 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 WDR48Q8TAF3 677 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 FAM174AQ8TBP5 190 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 NAT6Q93015 286 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 LIN37Q96GY3 246 aaPredicted RBP9.89□□□□□ -0.83
IFT88-203ENST00000389373 SLC39A13Q96H72 371 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 ZNF396Q96N95 335 aaPredicted RBP9.89□□□□□ -0.83
IFT88-203ENST00000389373 SLC17A9Q9BYT1 436 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 STRADBQ9C0K7 418 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 EPN3Q9H201 632 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 ZSCAN16Q9H4T2 348 aaPredicted RBP9.89□□□□□ -0.83
IFT88-203ENST00000389373 LRRC4CQ9HCJ2 640 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 SPASTQ9UBP0 616 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 SLC12A6Q9UHW9 1150 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 VPS28Q9UK41 221 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 DOLKQ9UPQ8 538 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 MAPK8IP1Q9UQF2 711 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 MAN2B2Q9Y2E5 1009 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 PCDHB11Q9Y5F2 797 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 PCDHGA4Q9Y5G9 962 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 HS3ST3A1Q9Y663 406 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 SPTA1P02549 2419 aa9.89□□□□□ -0.83
IFT88-203ENST00000389373 SYNJ2BP-COX16A0A087WUM0 186 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 SPTY2D1-AS1A0A0U1RR47 76 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 M0QYV0 167 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 RNF103O00237 685 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 O00370 1275 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 TPP1O14773 563 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 RAD51BO15315 384 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 CALCAP01258 141 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 FYNP06241 537 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 NME1P15531 152 aaKnown RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 GTF2H1P32780 548 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 NOS2P35228 1153 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 RABIFP47224 123 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 PLK1P53350 603 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 MAPK10P53779 464 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 OXCT1P55809 520 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 YWHAEP62258 255 aaKnown RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 CCL7P80098 99 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 SGCGQ13326 291 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 ADAM9Q13443 819 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 SERINC3Q13530 473 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 TCEA2Q15560 299 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 PRRT3Q5FWE3 981 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 ARSIQ5FYB1 569 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 FOXD4L5Q5VV16 416 aaPredicted RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 CXorf57Q6NSI4 855 aaKnown RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 ESRP1Q6NXG1 681 aaKnown RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 KYAT3Q6YP21 454 aaKnown RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 ERN2Q76MJ5 926 aaKnown RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 SH2D3CQ8N5H7 860 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 ATP11CQ8NB49 1132 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 CHST14Q8NCH0 376 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 GRIN3AQ8TCU5 1115 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 TMEM174Q8WUU8 243 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 SLC35F5Q8WV83 523 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 BTN2A2Q8WVV5 523 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 JPH3Q8WXH2 748 aaPredicted RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 FOXD4L4Q8WXT5 416 aaPredicted RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 FAXDC2Q96IV6 333 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 FEM1CQ96JP0 617 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms