RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 TMEM233B4DJY2 109 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 FAM72CH0Y354 149 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 H3BNX3 289 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 CBFA2T3O75081 653 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 USP2O75604 605 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 IL18RAPO95256 599 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 TSPAN8P19075 237 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 TAZQ16635 292 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 PAN2Q504Q3 1202 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 FAM72AQ5TYM5 149 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 FAM72DQ6L9T8 149 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 ZNF280DQ6N043 979 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 HFE2Q6ZVN8 426 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 FAM72BQ86X60 149 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 SNX32Q86XE0 403 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 GFM2Q969S9 779 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 COX4I2Q96KJ9 171 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 BTBD9Q96Q07 612 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 TRPC7Q9HCX4 862 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 CHRAC1Q9NRG0 131 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 SNX15Q9NRS6 342 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 IARS2Q9NSE4 1012 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 BIRC5O15392 142 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 FGFR3P22607 806 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 CDKL1Q00532 357 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 NCBP2-AS2Q69YL0 99 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 ERI1Q8IV48 349 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 RAVER1Q8IY67 606 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 SNX27Q96L92 541 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 CDRT15Q96T59 188 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 CCT7Q99832 543 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 SEMA6AQ9H2E6 1030 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 TASP1Q9H6P5 420 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 C20orf96Q9NUD7 363 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 CDH22Q9UJ99 828 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 NUDT5Q9UKK9 219 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 GNEQ9Y223 722 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 FADS3Q9Y5Q0 445 aa12.69□□□□□ -0.38
PRPF40B-202ENST00000380281 A0A096LPK6 155 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 FAM159BA6NKW6 160 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 K7EPI3 171 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 MATN2O00339 956 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 HBP1O60381 514 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 BEST1O76090 585 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 FAM58BPP0C7Q3 252 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 NAT1P18440 290 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 PLK1P53350 603 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 NAGLUP54802 743 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 NR1H2P55055 460 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 SLC7A14Q8TBB6 771 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 NEURL2Q9BR09 285 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 COPS7BQ9H9Q2 264 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 CYP4F12Q9HCS2 524 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 KIAA1522Q9P206 1035 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 FETUBQ9UGM5 382 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 BRWD3Q6RI45 1802 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 DENRO43583 198 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 DDNO94850 711 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 TGM2P21980 687 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 GNL1P36915 607 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 ZNF280AP59817 542 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 MCCD1P59942 119 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 ZNF567Q8N184 647 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 RNF34Q969K3 372 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 OSBPL6Q9BZF3 934 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 MTMR10Q9NXD2 777 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 ERAP1Q9NZ08 941 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 SSX2IPQ9Y2D8 614 aa12.68□□□□□ -0.38
PRPF40B-202ENST00000380281 BCLAF3A2AJT9 711 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 TRDMT1O14717 391 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 ENDOD1O94919 500 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 CSPG5O95196 566 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 C22orf31O95567 290 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 LGALS2P05162 132 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 JUNP05412 331 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 PROZP22891 400 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 RPL10P27635 214 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 XIAPP98170 497 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 POU5F1BQ06416 359 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 PDAP1Q13442 181 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 PIGZQ86VD9 579 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 CROCCP3Q8IVE0 287 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 APBA2Q99767 749 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 SNX25Q9H3E2 840 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 Q9H521 79 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 SLC38A7Q9NVC3 462 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 COPG2Q9UBF2 871 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 GSRP00390 522 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 SERPINE1P05121 402 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 HDCP19113 662 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 MAP3K7CLP57077 242 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 ABCE1P61221 599 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 NRF1Q16656 503 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 OGFRL1Q5TC84 451 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 SLC9A4Q6AI14 798 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 FSTL4Q6MZW2 842 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 SORT1Q99523 831 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms