RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 LOXHD1Q8IVV2 1947 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 BRWD3Q6RI45 1802 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 PHIPQ8WWQ0 1821 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 A0A1W2PQH9 124 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 PPEF2O14830 753 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 ZNF623O75123 536 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 BANF1O75531 89 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 SUPT7LO94864 414 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 TMCC1O94876 653 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 AP2A1O95782 977 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 MYL4P12829 197 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 MAP4P27816 1152 aaKnown RBP5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 GLUD2P49448 558 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 ERFP50548 548 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 KLF1Q13351 362 aaPredicted RBP5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 PARP15Q460N3 678 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 C17orf99Q6UX52 265 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 UNC5AQ6ZN44 842 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 PTAR1Q7Z6K3 402 aaPredicted RBP5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 SAPCD2Q86UD0 394 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 RELL1Q8IUW5 271 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 GANCQ8TET4 914 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 AGAP11Q8TF27 550 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 DEFB118Q96PH6 123 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 HAPLN3Q96S86 360 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 THTPAQ9BU02 230 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 CLPBQ9H078 707 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 GBA3Q9H227 469 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 TRMT13Q9NUP7 481 aaKnown RBP5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 PIH1D1Q9NWS0 290 aaKnown RBP5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 DTLQ9NZJ0 730 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 HACD3Q9P035 362 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 IGSF9Q9P2J2 1179 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 SFMBT1Q9UHJ3 866 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 TAGLN3Q9UI15 199 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 SCN9AQ15858 1988 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 YJEFN3A6XGL0 299 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 E7ENQ6 273 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 ARVCFO00192 962 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 TPP1O14773 563 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 MYO1DO94832 1006 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 LRIG2O94898 1065 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 ITGA2BP08514 1039 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 LAG3P18627 525 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 CLCN5P51795 746 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 CCL23P55773 120 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 CCDC15Q0P6D6 951 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 SEMA5AQ13591 1074 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 ITGA9Q13797 1035 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 GTF2H3Q13889 308 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 CSHL1Q14406 222 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 INSCQ1MX18 579 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 VARS2Q5ST30 1063 aaKnown RBP5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 FNBP1LQ5T0N5 605 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 FUT10Q6P4F1 479 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 CES3Q6UWW8 571 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 PACS1Q6VY07 963 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 TAC4Q86UU9 113 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 LCA5Q86VQ0 697 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 ST13P4Q8IZP2 240 aaPredicted RBP5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 NAT8LQ8N9F0 302 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 HIPK4Q8NE63 616 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 RDH11Q8TC12 318 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC26A7Q8TE54 656 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 SGF29Q96ES7 293 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 ASB2Q96Q27 587 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 CENPKQ9BS16 269 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 OSBPL7Q9BZF2 842 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 TAS2R13Q9NYV9 303 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 FNIP2Q9P278 1114 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 HAO1Q9UJM8 370 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 RNF112Q9ULX5 631 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 ANKRD31Q8N7Z5 1873 aa5.4□□□□□ -1.54
SMNDC1-202ENST00000369603 FAM95CA0A1B0GW59 222 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 DNM1LO00429 736 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 XYLBO75191 536 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 AVILO75366 819 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 FGF1P05230 155 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 HLA-DPA1P20036 260 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 GLRBP48167 497 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 POLD2P49005 469 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 NDUFV1P49821 464 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 TAF10Q12962 218 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 DYNC1I2Q13409 638 aaKnown RBP5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 MSLNQ13421 630 aaPredicted RBP5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 RARS2Q5T160 578 aaKnown RBP5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 ZNF618Q5T7W0 954 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 ANKRD22Q5VYY1 191 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC9A4Q6AI14 798 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 RGS9BPQ6ZS82 235 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 DDX53Q86TM3 631 aaKnown RBP5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 STK40Q8N2I9 435 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 LPCAT1Q8NF37 534 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 NDRG1Q92597 394 aaKnown RBP5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 INPP5DQ92835 1189 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 OXNAD1Q96HP4 312 aaPredicted RBP5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 ZMAT2Q96NC0 199 aaKnown RBP5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 OSBPL2Q9H1P3 480 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms