RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ATP11CQ8NB49 1132 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 SUMF1Q8NBK3 374 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 LRRC19Q9H756 370 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 TRIM10Q9UDY6 481 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 FRYLO94915 3013 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 CEP192Q8TEP8 1941 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 PJA2O43164 708 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 CNR2P34972 360 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 ZNF135P52742 658 aaPredicted RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 RPS14P62263 151 aaKnown RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 SIM2Q14190 667 aaPredicted RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 KBTBD6Q86V97 674 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 SIPA1Q96FS4 1042 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 SLC39A8Q9C0K1 460 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 MBD1Q9UIS9 605 aaPredicted RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 CYP8B1Q9UNU6 501 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 TARSL2A2RTX5 802 aaKnown RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 KDELR3O43731 214 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 ZNF821O75541 412 aaPredicted RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 KRT7P08729 469 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 TNNT1P13805 278 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 ETFBP38117 255 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 SERPINH1P50454 418 aaKnown RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 YBEYP58557 167 aaPredicted RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 USP39Q53GS9 565 aaKnown RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 AFMIDQ63HM1 303 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 C22orf39Q6P5X5 142 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 CEP68Q76N32 757 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 ASCL5Q7RTU5 278 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 KIAA1328Q86T90 577 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 ZNF354CQ86Y25 554 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 TPCN2Q8NHX9 752 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 RAPGEF5Q92565 580 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 PRCCQ92733 491 aaPredicted RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 NKD2Q969F2 451 aaPredicted RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 FAM129BQ96TA1 746 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 CALN1Q9BXU9 219 aa15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 RSPH9Q9H1X1 276 aaPredicted RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 SMG5Q9UPR3 1016 aaKnown RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 FCF1Q9Y324 198 aaKnown RBP15.4■□□□□ 0.06
SMPDL3A-201ENST00000368440 TNRC6BQ9UPQ9 1833 aaKnown RBP15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 ZBTB24O43167 697 aaPredicted RBP15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 ARHGAP6O43182 974 aa15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 BNIP3LO60238 219 aa15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 PLA2G5P39877 138 aa15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 SERINC3Q13530 473 aa15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 PARP15Q460N3 678 aa15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 RETSATQ6NUM9 610 aa15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 KCTD6Q8NC69 237 aa15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 TNKS2Q9H2K2 1166 aa15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 USP36Q9P275 1121 aaKnown RBP15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 ALG6Q9Y672 507 aa15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 THADAQ6YHU6 1953 aa15.39■□□□□ 0.05
SMPDL3A-201ENST00000368440 IGHV1OR15-9A0A0B4J2B8 117 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 PRR23AA6NEV1 266 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 BTNL10A8MVZ5 291 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 SPOPO43791 374 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 SLC1A1P43005 524 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 PAPOLAP51003 745 aaKnown RBP15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 NDST2P52849 883 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 METAP1P53582 386 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 ZFYVE27Q5T4F4 411 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 ZNF776Q68DI1 518 aaPredicted RBP15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 ARHGAP36Q6ZRI8 547 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 MMAAQ8IVH4 418 aaKnown RBP15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 PCDH19Q8TAB3 1148 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 FAM122AQ96E09 287 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 RCOR3Q9P2K3 495 aaPredicted RBP15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 HPCAL4Q9UM19 191 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 SPAG17Q6Q759 2223 aa15.38■□□□□ 0.05
SMPDL3A-201ENST00000368440 J3KR12 359 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 RNF103O00237 685 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 DFFAO00273 331 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 LMNAP02545 664 aaKnown RBP15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 C7P10643 843 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 KDELR1P24390 212 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 MARCKSL1P49006 195 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 TPMTP51580 245 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 CLCN6P51797 869 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 PLK5Q496M5 336 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 ANKRD20A8PQ5CZ79 823 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 C11orf63Q6NUN7 778 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 TMCO3Q6UWJ1 677 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 METTL3Q86U44 580 aaKnown RBP15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 OR2A12Q8NGT7 310 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 ZNF670Q9BS34 389 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 DUSP15Q9H1R2 295 aaPredicted RBP15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 FBRSQ9HAH7 460 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 PDFQ9HBH1 243 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 ITM2CQ9NQX7 267 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 SARDHQ9UL12 918 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 ADGRG1Q9Y653 693 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 ABCA7Q8IZY2 2146 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 SHROOM3Q8TF72 1996 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 LRRD1A4D1F6 860 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 C3orf70A6NLC5 250 aaPredicted RBP15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 MID1O15344 667 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 KRT1P04264 644 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 PSMD8P48556 350 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 SLC20A2Q08357 652 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms