RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 EPOPA6NHQ4 379 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 GOLGA8MH3BSY2 632 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 HGSO14964 777 aaPredicted RBP13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 PER2O15055 1255 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 NCAM2O15394 837 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 MFSD11O43934 449 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 RFPL2O75678 378 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 F11P03951 625 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 KCNQ1P51787 676 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 GPX6P59796 221 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 COG7P83436 770 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 NRG1Q02297 640 aaPredicted RBP13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 GPM6BQ13491 265 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 SLC1A5Q15758 541 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 ACCSLQ4AC99 568 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 ADGRD2Q7Z7M1 963 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 C14orf80Q86SX3 495 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 TMC8Q8IU68 726 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 MRRFQ96E11 262 aaKnown RBP13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 SLC22A12Q96S37 553 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 TUBB6Q9BUF5 446 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 ACSS3Q9H6R3 686 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 KIF9Q9HAQ2 790 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 CHKBQ9Y259 395 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 HS3ST4Q9Y661 456 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 E7ESA3 106 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 H3BNC9 293 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 STK10O94804 968 aaKnown RBP13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 EPCAMP16422 314 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 MLLT6P55198 1093 aaPredicted RBP13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 MANEALQ5VSG8 457 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 PDE12Q6L8Q7 609 aaKnown RBP13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 C4orf22Q6V702 233 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 GAREM2Q75VX8 874 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 NPWQ8N729 165 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 CPT1BQ92523 772 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 WBP2Q969T9 261 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 QKIQ96PU8 341 aaKnown RBP eCLIP13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 VPS11Q9H270 941 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 SLCO1B3Q9NPD5 702 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 TRIM33Q9UPN9 1127 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 C5orf42Q9H799 3197 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 NOTCH4Q99466 2003 aa13.44□□□□□ -0.26
SQSTM1-201ENST00000360718 E9PAM4 449 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 CCL16O15467 120 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 CLUHO75153 1309 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 CHRM1P11229 460 aaPredicted RBP13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 MX2P20592 715 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 RBL1P28749 1068 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 RPL22P35268 128 aaKnown RBP13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 HARS2P49590 506 aaKnown RBP13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 RTL10Q7L3V2 364 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 CCNYQ8ND76 341 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 FBXO36Q8NEA4 188 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 OLFM3Q96PB7 478 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 CYP2S1Q96SQ9 504 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 PAFAH2Q99487 392 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 DHRS4Q9BTZ2 278 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 GKN1Q9NS71 199 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 HCFC1R1Q9NWW0 138 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 PAK5Q9P286 719 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 IQANK1A0A1B0GTG1 560 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 CLASP2O75122 1294 aaKnown RBP13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 SSTR1P30872 391 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 AP1B1Q10567 949 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 PPM1LQ5SGD2 360 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 OTOAQ7RTW8 1153 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 RBM23Q86U06 439 aaKnown RBP13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 TNS4Q8IZW8 715 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 LZTR1Q8N653 840 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 MAB21L3Q8N8X9 362 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 C10orf82Q8WW14 230 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 MYEOVQ96EZ4 313 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 THOC1Q96FV9 657 aaKnown RBP13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 GCNAQ96QF7 691 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 CYTH2Q99418 400 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 BRD8Q9H0E9 1235 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 USP29Q9HBJ7 922 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 SAR1AQ9NR31 198 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 MAN1C1Q9NR34 630 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 GRID1Q9ULK0 1009 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 RPL26L1Q9UNX3 145 aaKnown RBP13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 IKBKGQ9Y6K9 419 aa13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 HELZP42694 1942 aaKnown RBP13.43□□□□□ -0.26
SQSTM1-201ENST00000360718 DIAPH2O60879 1101 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 SPAG6O75602 509 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 C1RP00736 705 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 GJA1P17302 382 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 HOXC13P31276 330 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 SLC11A2P49281 568 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 CCNG1P51959 295 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 ZXDBP98169 803 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 CYP4F8P98187 520 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 MS4A13Q5J8X5 152 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 FNBP1LQ5T0N5 605 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 TXNDC8Q6A555 127 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 NADSYN1Q6IA69 706 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 ZNF683Q8IZ20 524 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 GDPD5Q8WTR4 605 aa13.42□□□□□ -0.26
SQSTM1-201ENST00000360718 ARNTL2Q8WYA1 636 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms