RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CASS4Q9NQ75 786 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 HCFC1R1Q9NWW0 138 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 YBX2Q9Y2T7 364 aaKnown RBP21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 SH3BP1Q9Y3L3 701 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 TTLL3Q9Y4R7 772 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 ILVBLA1L0T0 632 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 TYW5A2RUC4 315 aaKnown RBP21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 POC1B-GALNT4F8VUJ3 575 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 PRAMEF11O60813 436 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 GJA1P17302 382 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 SGSHP51688 502 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 GEMIN4P57678 1058 aaKnown RBP21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 TNK2Q07912 1038 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 RASA2Q15283 850 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 HTR3DQ70Z44 454 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 LINC00523Q86TU6 105 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 MPP5Q8N3R9 675 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 SHKBP1Q8TBC3 707 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 PABPC5Q96DU9 382 aaKnown RBP21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 OXNAD1Q96HP4 312 aaPredicted RBP21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 ZNF419Q96HQ0 510 aaPredicted RBP21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 ZNF599Q96NL3 588 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 XPO6Q96QU8 1125 aaKnown RBP21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 CYTH2Q99418 400 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 NAT9Q9BTE0 207 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 SLC46A2Q9BY10 475 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 ZDHHC7Q9NXF8 308 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 SOBPA7XYQ1 873 aa21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 RHOCP08134 193 aa21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 MGAT1P26572 445 aa21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 SESN2P58004 480 aaPredicted RBP21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 ARHGAP15Q53QZ3 475 aa21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 HJURPQ8NCD3 748 aaPredicted RBP21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 OR52K1Q8NGK4 314 aa21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 ABHD8Q96I13 439 aa21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 EURLQ9NYK6 297 aa21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 CFAP97Q9P2B7 532 aa21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 DNMT3BQ9UBC3 853 aaKnown RBP21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 CTNNAL1Q9UBT7 734 aa21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 TBC1D30Q9Y2I9 924 aa21.87■■□□□ 1.09
TSPAN3-202ENST00000346495 TCRBV9S1A1TA0A576 114 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 RHOP08100 348 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 POU2F2P09086 479 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 GCAP28676 217 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 HPDP32754 393 aaPredicted RBP21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 ETFBP38117 255 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 CCR2P41597 374 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 PPP2R2AP63151 447 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 SKOR1P84550 965 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 SLC10A7Q0GE19 358 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 STXBP5Q5T5C0 1151 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 GPR158Q5T848 1215 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 TMCO4Q5TGY1 634 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 UNC5AQ6ZN44 842 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 TAOK1Q7L7X3 1001 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 DNAAF3Q8N9W5 541 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 SLC25A51Q9H1U9 297 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 NT5MQ9NPB1 228 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 ARHGAP26Q9UNA1 814 aa21.86■■□□□ 1.09
TSPAN3-202ENST00000346495 GFRA2O00451 464 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 NRG2O14511 850 aaPredicted RBP21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 TBL1XO60907 577 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 NPY2RP49146 381 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 LBRQ14739 615 aaKnown RBP21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 IL31Q6EBC2 164 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 CASC4Q6P4E1 433 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 ZNF783Q6ZMS7 281 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 CPXM2Q8N436 756 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 SPATA22Q8NHS9 363 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 GSDMBQ8TAX9 411 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 TMA16Q96EY4 203 aaKnown RBP21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 LMAN2LQ9H0V9 348 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 TASP1Q9H6P5 420 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 PDFQ9HBH1 243 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 HAUS2Q9NVX0 235 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 UBP1Q9NZI7 540 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 BFARQ9NZS9 450 aa21.85■■□□□ 1.09
TSPAN3-202ENST00000346495 A0A0D9SEW6 157 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 LEFTY2O00292 366 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 PER2O15055 1255 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 KDELR3O43731 214 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 USP12O75317 370 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 PGAM1P18669 254 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 PBX2P40425 430 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 OXCT1P55809 520 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 NR1H3Q13133 447 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 STEAP4Q687X5 459 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 OR7D4Q8NG98 312 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 OR52K2Q8NGK3 314 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 TBL1YQ9BQ87 522 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 DHRS4Q9BTZ2 278 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 PRKD2Q9BZL6 878 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 SYBUQ9NX95 663 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 SAMD15Q9P1V8 674 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 PSMC3IPQ9P2W1 217 aaPredicted RBP21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 TBK1Q9UHD2 729 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 HCFC2Q9Y5Z7 792 aa21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.84■■□□□ 1.09
TSPAN3-202ENST00000346495 MOSPD3O75425 235 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms