RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 FAM163BP0C2L3 166 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 ERCC2P18074 760 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 ELK3P41970 407 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 PPP4R4Q6NUP7 873 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 WDR93Q6P2C0 686 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 ZNF513Q8N8E2 541 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 TNIP2Q8NFZ5 429 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 DPEP3Q9H4B8 488 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 CATSPERZQ9NTU4 200 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 CHADO15335 359 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 SOAT1P35610 550 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 MTHFRP42898 656 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 SKP1P63208 163 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 PFKPQ01813 784 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 GRAMD1BQ3KR37 738 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 ZNF470Q6ECI4 717 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 SYTL1Q8IYJ3 562 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 HNRNPLLQ8WVV9 542 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 KREMEN1Q96MU8 473 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 GULP1Q9UBP9 304 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 AGO1Q9UL18 857 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 LAMB4A4D0S4 1761 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 ADAMTS3O15072 1205 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 CNMDO75829 334 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 GUCY1A3Q02108 690 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 C12orf50Q8NA57 414 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 HES6Q96HZ4 224 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 FAM111AQ96PZ2 611 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 ZBTB22O15209 634 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 CFIP05156 583 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 GAD2Q05329 585 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 INPP5AQ14642 412 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 NPY5RQ15761 445 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 TXNDC8Q6A555 127 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 TAGAPQ8N103 731 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 PLD4Q96BZ4 506 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 CMTM5Q96DZ9 223 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 IGSF21Q96ID5 467 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 RCOR3Q9P2K3 495 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 ANKRD6Q9Y2G4 727 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 MGEA5O60502 916 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 GALTP07902 379 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 RAD23BP54727 409 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 GYS2P54840 703 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 PARP15Q460N3 678 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 C16orf89Q6UX73 402 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 MTSS1LQ765P7 747 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 TSTD1Q8NFU3 115 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 TLR10Q9BXR5 811 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 NCKIPSDQ9NZQ3 722 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 APPL1Q9UKG1 709 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 GPSM3Q9Y4H4 160 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 GOT1P17174 413 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 DGKGP49619 791 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 CNTN1Q12860 1018 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 KBTBD12Q3ZCT8 623 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 RFWD2Q8NHY2 731 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 STK32AQ8WU08 396 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 SEMA3CQ99985 751 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 PGAP2Q9UHJ9 254 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 SLCO1B7G3V0H7 640 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 ZBTB14O43829 449 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 HNRNPH3P31942 346 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 ESRRGP62508 458 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.64■□□□□ 0.258e-7■■■□□ 15.1
SMARCA4-201ENST00000344626 ELOVL6Q9H5J4 265 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 ACTR8Q9H981 624 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 THEGQ9P2T0 379 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 A0A1W2PQ67 120 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 BUD23O43709 281 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 USP12O75317 370 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 FSBPO95073 299 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 PSMD8P48556 350 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 RBBP8Q99708 897 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 DNAJB4Q9UDY4 337 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 SQORQ9Y6N5 450 aa16.64■□□□□ 0.25
SMARCA4-201ENST00000344626 PSMD12O00232 456 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 MMP8P22894 467 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 DGKAP23743 735 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 IRF2BP2Q7Z5L9 587 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 ZNF280BQ86YH2 543 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 REPS1Q96D71 796 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 ECT2Q9H8V3 914 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 L2HGDHQ9H9P8 463 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 ZNHIT2Q9UHR6 403 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 ADRA1BP35368 520 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 HSP90AA5PQ58FG0 334 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 BBS12Q6ZW61 710 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 LCA5Q86VQ0 697 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 HMGB4Q8WW32 186 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 TUBGCP3Q96CW5 907 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 ARHGAP26Q9UNA1 814 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 KRT6AP02538 564 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 SOD2P04179 222 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 KRT6BP04259 564 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 PCNAP12004 261 aa16.63■□□□□ 0.25
SMARCA4-201ENST00000344626 EEF1B2P24534 225 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms