RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 FOXN2P32314 431 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 PPM1AP35813 382 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 ETFBP38117 255 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 NAPEPLDQ6IQ20 393 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 LRRC49Q8IUZ0 686 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 CCNJLQ8IV13 435 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 TCEAL8Q8IYN2 117 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 KLHL23Q8NBE8 558 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 TCP10LQ8TDR4 215 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 SLC22A12Q96S37 553 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 FICDQ9BVA6 458 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 TRPC7Q9HCX4 862 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 SLC17A7Q9P2U7 560 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 ZNF180Q9UJW8 692 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 PSAT1Q9Y617 370 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 HMX2A2RU54 273 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 LILRB3O75022 631 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 KRT37O76014 449 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 SNRPAP09012 282 aaKnown RBP22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 SLC11A2P49281 568 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 SGSHP51688 502 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 EPHB3P54753 998 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 CDH17Q12864 832 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 ZKSCAN8Q15776 578 aaPredicted RBP22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 PCSK7Q16549 785 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 ANO4Q32M45 955 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 ZNF276Q8N554 614 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 TTC17Q96AE7 1141 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 TRMT2BQ96GJ1 504 aaKnown RBP22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 ZNF778Q96MU6 729 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 TGS1Q96RS0 853 aaKnown RBP22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 TBL1YQ9BQ87 522 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 NAT9Q9BTE0 207 aa22.83■■□□□ 1.25
PDLIM2-203ENST00000339162 A0A0D9SEW6 157 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 NIPAL4Q0D2K0 466 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 MARC1Q5VT66 337 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 KLHDC10Q6PID8 442 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 LVRNQ6Q4G3 990 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 OR52K2Q8NGK3 314 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 ZBP1Q9H171 429 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 FGFR1OP2Q9NVK5 253 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 KIAA1671Q9BY89 1806 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 TGM5O43548 720 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 TSPAN3O60637 253 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 ANXA9O76027 345 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 OAS1P00973 400 aaKnown RBP22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 ADRA1DP25100 572 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 IL9RQ01113 521 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 HNRNPDQ14103 355 aaKnown RBP22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 SH2D5Q6ZV89 423 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 SPOCK2Q92563 424 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 PRICKLE1Q96MT3 831 aaPredicted RBP22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 DONSONQ9NYP3 566 aa22.82■■□□□ 1.24
PDLIM2-203ENST00000339162 ANKRD65E5RJM6 399 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 RENBPP51606 427 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 CYS1Q717R9 158 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 TMEM135Q86UB9 458 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 RASSF3Q86WH2 238 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 CERS2Q96G23 380 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 SEC16BQ96JE7 1060 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 ACTL7AQ9Y615 435 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 ZCWPW2A0A1B0GU75 182 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 WDR91A4D1P6 747 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 LPXNO60711 386 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 GJB3O75712 270 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 CHRNA4P43681 627 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 NPY2RP49146 381 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 SERINC3Q13530 473 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 POU6F1Q14863 301 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 ANKRD20A4Q4UJ75 823 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 SPANXN3Q5MJ09 141 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 TXNDC8Q6A555 127 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 TMC7Q7Z402 723 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 LINC00523Q86TU6 105 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 CDKL2Q92772 493 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 MAGEB18Q96M61 343 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 ELAC2Q9BQ52 826 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 FSD1LQ9BXM9 530 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 ALG13Q9NP73 1137 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 SSU72Q9NP77 194 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 ZFATQ9P243 1243 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 PRKAG2Q9UGJ0 569 aa22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 AGO1Q9UL18 857 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-203ENST00000339162 LCHNA4D1U4 455 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 GOLGA8TH3BQL2 631 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 RFPL1O75677 317 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 KRT38O76015 456 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 CTSAP10619 480 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 MBL2P11226 248 aaPredicted RBP22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 NMBRP28336 390 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 SLC18A1P54219 525 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 HTRA4P83105 476 aaPredicted RBP22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 DSC2Q02487 901 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 LGSNQ5TDP6 509 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 HHATQ5VTY9 493 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 DENND5AQ6IQ26 1287 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 KLHDC8BQ8IXV7 354 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 MRGPRX2Q96LB1 330 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms