RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 IL10RBQ08334 325 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 SDE2Q6IQ49 451 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 PKN3Q6P5Z2 889 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 SYT10Q6XYQ8 523 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 NYAP1Q6ZVC0 841 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 BZW1Q7L1Q6 419 aaKnown RBP14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 BMP8AQ7Z5Y6 402 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 SLC13A5Q86YT5 568 aaPredicted RBP14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 LRRC49Q8IUZ0 686 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 SH2D3CQ8N5H7 860 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 IL17RCQ8NAC3 791 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 ATP11CQ8NB49 1132 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 TXNDC5Q8NBS9 432 aaKnown RBP14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 CCNYQ8ND76 341 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 LRRN4Q8WUT4 740 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 P3H4Q92791 437 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 MYO19Q96H55 970 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 C16orf45Q96MC5 204 aaPredicted RBP14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 OSBPL9Q96SU4 736 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 STON1Q9Y6Q2 735 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 MUC22E2RYF6 1773 aaPredicted RBP14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 TCRBV7S2A1N4TA0A589 114 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 TTC34A8MYJ7 566 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 CHURC1-FNTBB4DL54 471 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 SGK1O00141 431 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 MAFKO60675 156 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 ATG13O75143 517 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 SRCP12931 536 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 HLA-EP13747 358 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 PRKCHP24723 683 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 CASQ1P31415 396 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 SERPINH1P50454 418 aaKnown RBP14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 GEMIN4P57678 1058 aaKnown RBP14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 SLC20A2Q08357 652 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 KLF1Q13351 362 aaPredicted RBP14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 GAS6Q14393 721 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 PDK1Q15118 436 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 ACCSLQ4AC99 568 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 HSF5Q4G112 596 aaPredicted RBP14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 SERPINA13PQ6UXR4 307 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 ADAT2Q7Z6V5 191 aaKnown RBP14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 ZSCAN30Q86W11 494 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 FBXL6Q8N531 539 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 ZNF366Q8N895 744 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 KDM1BQ8NB78 822 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 CHRDQ9H2X0 955 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 PDFQ9HBH1 243 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 POLR3BQ9NW08 1133 aaPredicted RBP14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 UBA2Q9UBT2 640 aaPredicted RBP14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 MMP17Q9ULZ9 603 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 HS3ST2Q9Y278 367 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 TTC28Q96AY4 2481 aa14.36□□□□□ -0.11
APOBEC3B-202ENST00000335760 CXorf51AA0A1B0GTR3 108 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 PPP1R12AO14974 1030 aaPredicted RBP14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 FANCGO15287 622 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 SMAD6O43541 496 aaKnown RBP14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 ATP9BO43861 1147 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 ADAM23O75077 832 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 CD160O95971 181 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 FGGP02679 453 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 TCP1P17987 556 aaKnown RBP14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 MAGEA9P43362 315 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 VASPP50552 380 aaPredicted RBP14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 OTUD4Q01804 1114 aaKnown RBP14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 AP1B1Q10567 949 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 ENPP2Q13822 863 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 DLG2Q15700 870 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 LONRF2Q1L5Z9 754 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 EOGTQ5NDL2 527 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 PAPD7Q5XG87 772 aaKnown RBP14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 B4GALNT4Q76KP1 1039 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 COG1Q8WTW3 980 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 HDAC11Q96DB2 347 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 ERLEC1Q96DZ1 483 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 MS4A14Q96JA4 679 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 OLFM3Q96PB7 478 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 TSGA13Q96PP4 275 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 LGMNQ99538 433 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 GABRG3Q99928 467 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 FAM118BQ9BPY3 351 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 TMEM245Q9H330 911 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 MTG2Q9H4K7 406 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 DLGAP2Q9P1A6 1054 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 SLC8A2Q9UPR5 921 aa14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 FCF1Q9Y324 198 aaKnown RBP14.35□□□□□ -0.11
APOBEC3B-202ENST00000335760 CES2O00748 559 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 ZNF185O15231 689 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 TMCC1O94876 653 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 EPHX1P07099 455 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 CCNCP24863 283 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 CLCN6P51797 869 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 MTAPQ13126 283 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 NOMO1Q15155 1222 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 CYTH1Q15438 398 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 INO80DQ53TQ3 878 aaPredicted RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 TIGD7Q6NT04 549 aaPredicted RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 ZC3H18Q86VM9 953 aaKnown RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 CCDC13Q8IYE1 715 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 SPEM1Q8N4L4 309 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 TMEM105Q8N8V8 129 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms