RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 RAPGEF5Q92565 580 aa10□□□□□ -0.81
SYN3-201ENST00000332840 CENPIQ92674 756 aaPredicted RBP10□□□□□ -0.81
SYN3-201ENST00000332840 RNF34Q969K3 372 aa10□□□□□ -0.81
SYN3-201ENST00000332840 CIPCQ9C0C6 399 aa10□□□□□ -0.81
SYN3-201ENST00000332840 RAB17Q9H0T7 212 aa10□□□□□ -0.81
SYN3-201ENST00000332840 FBRSQ9HAH7 460 aa10□□□□□ -0.81
SYN3-201ENST00000332840 EPB41L5Q9HCM4 733 aa10□□□□□ -0.81
SYN3-201ENST00000332840 GDF3Q9NR23 364 aa10□□□□□ -0.81
SYN3-201ENST00000332840 ELOVL2Q9NXB9 296 aa10□□□□□ -0.81
SYN3-201ENST00000332840 PCYOX1Q9UHG3 505 aa10□□□□□ -0.81
SYN3-201ENST00000332840 AMACRQ9UHK6 382 aa10□□□□□ -0.81
SYN3-201ENST00000332840 CDV3Q9UKY7 258 aaKnown RBP10□□□□□ -0.81
SYN3-201ENST00000332840 PLA2G4CQ9UP65 541 aa10□□□□□ -0.81
SYN3-201ENST00000332840 UTP11Q9Y3A2 253 aaKnown RBP10□□□□□ -0.81
SYN3-201ENST00000332840 NUP205Q92621 2012 aa10□□□□□ -0.81
SYN3-201ENST00000332840 FAM208BQ5VWN6 2430 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 KCNU1A8MYU2 1149 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 PRR5-ARHGAP8B1AHC4 643 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 BHMG1C9JSJ3 638 aaPredicted RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 F5H5T6 163 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 TRIM24O15164 1050 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 SYNCRIPO60506 623 aaKnown RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 TSPAN3O60637 253 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 ENDOD1O94919 500 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 PABPC1P11940 636 aaKnown RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 CDKN2BP42772 138 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 SULT1E1P49888 294 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 MRPS25P82663 173 aaKnown RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 ARHGAP8P85298 464 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 DR1Q01658 176 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 GUCY2DQ02846 1103 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 ENPP2Q13822 863 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 CCNG2Q16589 344 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 TAZQ16635 292 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 SLC25A52Q3SY17 297 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 FAM133BQ5BKY9 247 aaKnown RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 ZC3H12AQ5D1E8 599 aaKnown RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 MS4A13Q5J8X5 152 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 SPDYCQ5MJ68 293 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 BRMS1LQ5PSV4 323 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 SH3PXD2AQ5TCZ1 1133 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 EGFLAMQ63HQ2 1017 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 CCDC137Q6PK04 289 aaKnown RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 SERPINA13PQ6UXR4 307 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 TMEM92Q6UXU6 159 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 SLC36A4Q6YBV0 504 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 CHSY1Q86X52 802 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 VSIG1Q86XK7 387 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 MFN1Q8IWA4 741 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 SFTPA1Q8IWL2 248 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 PGBD3Q8N328 593 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 FAM160A2Q8N612 972 aaPredicted RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 EIF1ADQ8N9N8 165 aaKnown RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 TTC13Q8NBP0 860 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 FIBINQ8TAL6 211 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 ADAM32Q8TC27 787 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 GRK7Q8WTQ7 553 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 HMGB4Q8WW32 186 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.99□□□□□ -0.81
SYN3-201ENST00000332840 HSPH1Q92598 858 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 PGAP3Q96FM1 320 aaPredicted RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 HEMGNQ9BXL5 484 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 FRMD8P1Q9BZ68 369 aaPredicted RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 PARD6AQ9NPB6 346 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 FAM114A2Q9NRY5 505 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 KLHL11Q9NVR0 708 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 THAP10Q9P2Z0 257 aaPredicted RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 GGA2Q9UJY4 613 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 STON1Q9Y6Q2 735 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 ATRXP46100 2492 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 HELZP42694 1942 aaKnown RBP9.99□□□□□ -0.81
SYN3-201ENST00000332840 DENND4CQ5VZ89 1909 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 ZFHX4Q86UP3 3567 aa9.99□□□□□ -0.81
SYN3-201ENST00000332840 AKAP13Q12802 2813 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 ANAPC1Q9H1A4 1944 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 A0A1W2PQF6 199 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 C3orf70A6NLC5 250 aaPredicted RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 M0QYT0 321 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 TTI1O43156 1089 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 TBL1XO60907 577 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 EPN2O95208 641 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 ASLP04424 464 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 POLR2EP19388 210 aaKnown RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 HLA-FP30511 346 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 P2RY2P41231 377 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 PTGIRP43119 386 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 CDH6P55285 790 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 HDAC4P56524 1084 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 SPEM2Q0P670 501 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 SRSF5Q13243 272 aaKnown RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 EIF4EBP2Q13542 120 aaPredicted RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 CUL1Q13616 776 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 SLC12A1Q13621 1099 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 KRT81Q14533 505 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 LLGL1Q15334 1064 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 CSRP2Q16527 193 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 GEN1Q17RS7 908 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 SMTNL2Q2TAL5 461 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 PLK5Q496M5 336 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 KCNT1Q5JUK3 1230 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms