RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 E2F5Q15329 346 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 MAML2Q8IZL2 1156 aaPredicted RBP26.5■■□□□ 1.83
SMDT1-201ENST00000331479 C17orf53Q8N3J3 647 aaPredicted RBP26.5■■□□□ 1.83
SMDT1-201ENST00000331479 KDM1BQ8NB78 822 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 HEMGNQ9BXL5 484 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 CD248Q9HCU0 757 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 EPHX1P07099 455 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 VASPP50552 380 aaPredicted RBP26.5■■□□□ 1.83
SMDT1-201ENST00000331479 CCR3P51677 355 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 PPP2R5EQ16537 467 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 ZNF569Q5MCW4 686 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 RETSATQ6NUM9 610 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 ATP11CQ8NB49 1132 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 FRS2Q8WU20 508 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 TLR10Q9BXR5 811 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 DTLQ9NZJ0 730 aa26.5■■□□□ 1.83
SMDT1-201ENST00000331479 CACNA1IQ9P0X4 2223 aa26.49■■□□□ 1.83
SMDT1-201ENST00000331479 ATP9BO43861 1147 aa26.49■■□□□ 1.83
SMDT1-201ENST00000331479 CST8O60676 142 aa26.49■■□□□ 1.83
SMDT1-201ENST00000331479 VAV1P15498 845 aa26.49■■□□□ 1.83
SMDT1-201ENST00000331479 NNMTP40261 264 aa26.49■■□□□ 1.83
SMDT1-201ENST00000331479 SERPINH1P50454 418 aaKnown RBP26.49■■□□□ 1.83
SMDT1-201ENST00000331479 COPS2P61201 443 aa26.49■■□□□ 1.83
SMDT1-201ENST00000331479 RPS6KA1Q15418 735 aa26.49■■□□□ 1.83
SMDT1-201ENST00000331479 NPNTQ6UXI9 565 aa26.49■■□□□ 1.83
SMDT1-201ENST00000331479 PDFQ9HBH1 243 aa26.49■■□□□ 1.83
SMDT1-201ENST00000331479 GOLGA6L9A6NEM1 432 aa26.48■■□□□ 1.83
SMDT1-201ENST00000331479 DLG2Q15700 870 aa26.48■■□□□ 1.83
SMDT1-201ENST00000331479 HNRNPA1L2Q32P51 320 aaKnown RBP26.48■■□□□ 1.83
SMDT1-201ENST00000331479 TSSK4Q6SA08 328 aa26.48■■□□□ 1.83
SMDT1-201ENST00000331479 SLC35F6Q8N357 371 aa26.48■■□□□ 1.83
SMDT1-201ENST00000331479 HHIPQ96QV1 700 aa26.48■■□□□ 1.83
SMDT1-201ENST00000331479 OSBPL8Q9BZF1 889 aa26.48■■□□□ 1.83
SMDT1-201ENST00000331479 PRDM16Q9HAZ2 1276 aa26.48■■□□□ 1.83
SMDT1-201ENST00000331479 PRMT8Q9NR22 394 aaPredicted RBP26.48■■□□□ 1.83
SMDT1-201ENST00000331479 SAE1Q9UBE0 346 aaPredicted RBP26.48■■□□□ 1.83
SMDT1-201ENST00000331479 IPO11Q9UI26 975 aaKnown RBP26.48■■□□□ 1.83
SMDT1-201ENST00000331479 SLC8A2Q9UPR5 921 aa26.48■■□□□ 1.83
SMDT1-201ENST00000331479 HEY1Q9Y5J3 304 aa26.48■■□□□ 1.83
SMDT1-201ENST00000331479 ZNF318Q5VUA4 2279 aa26.48■■□□□ 1.83
SMDT1-201ENST00000331479 K7ESF4 209 aa26.47■■□□□ 1.83
SMDT1-201ENST00000331479 LAMTOR5O43504 91 aa26.47■■□□□ 1.83
SMDT1-201ENST00000331479 KIF5CO60282 957 aa26.47■■□□□ 1.83
SMDT1-201ENST00000331479 PRAMEF11O60813 436 aa26.47■■□□□ 1.83
SMDT1-201ENST00000331479 SLC20A2Q08357 652 aa26.47■■□□□ 1.83
SMDT1-201ENST00000331479 GALNT2Q10471 571 aa26.47■■□□□ 1.83
SMDT1-201ENST00000331479 TFDP2Q14188 446 aa26.47■■□□□ 1.83
SMDT1-201ENST00000331479 ACCSLQ4AC99 568 aa26.47■■□□□ 1.83
SMDT1-201ENST00000331479 LRRN4Q8WUT4 740 aa26.47■■□□□ 1.83
SMDT1-201ENST00000331479 UBE2Q2Q8WVN8 375 aa26.47■■□□□ 1.83
SMDT1-201ENST00000331479 KCND1Q9NSA2 647 aa26.47■■□□□ 1.83
SMDT1-201ENST00000331479 FCF1Q9Y324 198 aaKnown RBP26.47■■□□□ 1.83
SMDT1-201ENST00000331479 CKAP5Q14008 2032 aa26.47■■□□□ 1.83
SMDT1-201ENST00000331479 ZSCAN5CA6NGD5 496 aaPredicted RBP26.46■■□□□ 1.83
SMDT1-201ENST00000331479 ENC1O14682 589 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 MAFKO60675 156 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 ZNF821O75541 412 aaPredicted RBP26.46■■□□□ 1.83
SMDT1-201ENST00000331479 ZFXP17010 805 aaPredicted RBP26.46■■□□□ 1.83
SMDT1-201ENST00000331479 PTPN7P35236 360 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 DGKEP52429 567 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 PTPRN2Q92932 1015 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 PRSS16Q9NQE7 514 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 CXorf51AA0A1B0GTR3 108 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 SYNCRIPO60506 623 aaKnown RBP26.46■■□□□ 1.83
SMDT1-201ENST00000331479 SIN3BO75182 1162 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 PAPSS2O95340 614 aaPredicted RBP26.46■■□□□ 1.83
SMDT1-201ENST00000331479 PECAM1P16284 738 aaPredicted RBP26.46■■□□□ 1.83
SMDT1-201ENST00000331479 IL10RBQ08334 325 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 CAMK2GQ13555 558 aaPredicted RBP26.46■■□□□ 1.83
SMDT1-201ENST00000331479 C9orf64Q5T6V5 341 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 ATPAF2Q8N5M1 289 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 SP110Q9HB58 689 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 SUN2Q9UH99 717 aa26.46■■□□□ 1.83
SMDT1-201ENST00000331479 TCRBV21S2A2A0A5A6 115 aa26.45■■□□□ 1.82
SMDT1-201ENST00000331479 GARSP41250 739 aaKnown RBP26.45■■□□□ 1.82
SMDT1-201ENST00000331479 CLCN6P51797 869 aa26.45■■□□□ 1.82
SMDT1-201ENST00000331479 STARD3Q14849 445 aa26.45■■□□□ 1.82
SMDT1-201ENST00000331479 Q6ZVU0 165 aa26.45■■□□□ 1.82
SMDT1-201ENST00000331479 BBS12Q6ZW61 710 aa26.45■■□□□ 1.82
SMDT1-201ENST00000331479 TNKS2Q9H2K2 1166 aa26.45■■□□□ 1.82
SMDT1-201ENST00000331479 EFR3BQ9Y2G0 817 aa26.45■■□□□ 1.82
SMDT1-201ENST00000331479 JRKLQ9Y4A0 524 aa26.45■■□□□ 1.82
SMDT1-201ENST00000331479 EDDM13A0A1B0GTR0 161 aa26.44■■□□□ 1.82
SMDT1-201ENST00000331479 KCNK3O14649 394 aa26.44■■□□□ 1.82
SMDT1-201ENST00000331479 TMCC1O94876 653 aa26.44■■□□□ 1.82
SMDT1-201ENST00000331479 PEX11BO96011 259 aa26.44■■□□□ 1.82
SMDT1-201ENST00000331479 TDGF1P13385 188 aa26.44■■□□□ 1.82
SMDT1-201ENST00000331479 PXNP49023 591 aaPredicted RBP26.44■■□□□ 1.82
SMDT1-201ENST00000331479 GEMIN4P57678 1058 aaKnown RBP26.44■■□□□ 1.82
SMDT1-201ENST00000331479 C22orf39Q6P5X5 142 aa26.44■■□□□ 1.82
SMDT1-201ENST00000331479 TSTD1Q8NFU3 115 aa26.44■■□□□ 1.82
SMDT1-201ENST00000331479 HAUS1Q96CS2 278 aa26.44■■□□□ 1.82
SMDT1-201ENST00000331479 OLFM3Q96PB7 478 aa26.44■■□□□ 1.82
SMDT1-201ENST00000331479 SLC6A17Q9H1V8 727 aa26.44■■□□□ 1.82
SMDT1-201ENST00000331479 UBA2Q9UBT2 640 aaPredicted RBP26.44■■□□□ 1.82
SMDT1-201ENST00000331479 GALR2O43603 387 aaPredicted RBP26.43■■□□□ 1.82
SMDT1-201ENST00000331479 TGM2P21980 687 aa26.43■■□□□ 1.82
SMDT1-201ENST00000331479 CETN2P41208 172 aa26.43■■□□□ 1.82
SMDT1-201ENST00000331479 COPAP53621 1224 aa26.43■■□□□ 1.82
SMDT1-201ENST00000331479 CSTF1Q05048 431 aaKnown RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms